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A life cycle stage of holometabolous insects in which the organism is a pupa and starts with the larval-pupal apolysis and ends with pupal-adult apolysis. chrysalides, aurelia, chrysalis, pupae\" source=\"EFO\">pupa </a>","a100011factorvaluespaceflight":"Not Applicable ","a100014factorvaluealteredgravity":"uG with random positioning machine ","a100017factorvaluealteredgravitysimulator":"RPM ","a100020factorvaluetreatment":"cold treatment ","a100023characteristicsgenotype":"Wild Type ","a100026protocolref":"P-MTAB-3322","a100027parametervaluesamplepreservationmethod":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/MESH/D000096\" title=\"A colorless liquid used as a solvent and an antiseptic. It is one of the ketone bodies produced during ketoacidosis. 2-Propanone\" source=\"MESH\">Acetone </a>","a100030commentoriginalsubmittedsamplename":"RMarco_Droso_5.CEL","a100031characteristicsbiosourcetype":"freeze_dried_sample "},{"a100000sourcename":"RMarco_Droso_7.CEL","a100001samplename":"Dmel_OR_wo_RPoM_0G_cold_Rep2_7","a100002characteristicsorganism":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/NCBITAXON/7227\" title=\"Sophophora melanogaster\" source=\"NCBITAXON\">Drosophila melanogaster </a>","a100005characteristicsstrain":"Oregon-R ","a100008characteristicsdevelopmentalstage":"<a target=\"_blank\" href=\"http://purl.obolibrary.org/obo/UBERON_0003143\" title=\"An organism at the pupal stage. A life cycle stage of holometabolous insects in which the organism is a pupa and starts with the larval-pupal apolysis and ends with pupal-adult apolysis. chrysalides, aurelia, chrysalis, pupae\" source=\"EFO\">pupa </a>","a100011factorvaluespaceflight":"Not Applicable ","a100014factorvaluealteredgravity":"uG with random positioning machine ","a100017factorvaluealteredgravitysimulator":"RPM ","a100020factorvaluetreatment":"cold treatment ","a100023characteristicsgenotype":"Wild Type ","a100026protocolref":"P-MTAB-3322","a100027parametervaluesamplepreservationmethod":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/MESH/D000096\" title=\"A colorless liquid used as a solvent and an antiseptic. It is one of the ketone bodies produced during ketoacidosis. 2-Propanone\" source=\"MESH\">Acetone </a>","a100030commentoriginalsubmittedsamplename":"RMarco_Droso_7.CEL","a100031characteristicsbiosourcetype":"freeze_dried_sample "},{"a100000sourcename":"RMarco_Droso_81.CEL","a100001samplename":"Dmel_OR_wo_RPoM_1G_cold_Rep1_81","a100002characteristicsorganism":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/NCBITAXON/7227\" title=\"Sophophora melanogaster\" source=\"NCBITAXON\">Drosophila melanogaster </a>","a100005characteristicsstrain":"Oregon-R ","a100008characteristicsdevelopmentalstage":"<a target=\"_blank\" href=\"http://purl.obolibrary.org/obo/UBERON_0003143\" title=\"An organism at the pupal stage. A life cycle stage of holometabolous insects in which the organism is a pupa and starts with the larval-pupal apolysis and ends with pupal-adult apolysis. chrysalides, aurelia, chrysalis, pupae\" source=\"EFO\">pupa </a>","a100011factorvaluespaceflight":"Not Applicable ","a100014factorvaluealteredgravity":"1G on Earth ","a100017factorvaluealteredgravitysimulator":"RPM ","a100020factorvaluetreatment":"cold treatment ","a100023characteristicsgenotype":"Wild Type ","a100026protocolref":"P-MTAB-3322","a100027parametervaluesamplepreservationmethod":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/MESH/D000096\" title=\"A colorless liquid used as a solvent and an antiseptic. It is one of the ketone bodies produced during ketoacidosis. 2-Propanone\" source=\"MESH\">Acetone </a>","a100030commentoriginalsubmittedsamplename":"RMarco_Droso_81.CEL","a100031characteristicsbiosourcetype":"freeze_dried_sample "},{"a100000sourcename":"RMarco_Droso_82.CEL","a100001samplename":"Dmel_OR_wo_RPoM_1G_cold_Rep2_82","a100002characteristicsorganism":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/NCBITAXON/7227\" title=\"Sophophora melanogaster\" source=\"NCBITAXON\">Drosophila melanogaster </a>","a100005characteristicsstrain":"Oregon-R ","a100008characteristicsdevelopmentalstage":"<a target=\"_blank\" href=\"http://purl.obolibrary.org/obo/UBERON_0003143\" title=\"An organism at the pupal stage. A life cycle stage of holometabolous insects in which the organism is a pupa and starts with the larval-pupal apolysis and ends with pupal-adult apolysis. chrysalides, aurelia, chrysalis, pupae\" source=\"EFO\">pupa </a>","a100011factorvaluespaceflight":"Not Applicable ","a100014factorvaluealteredgravity":"1G on Earth ","a100017factorvaluealteredgravitysimulator":"RPM ","a100020factorvaluetreatment":"cold treatment ","a100023characteristicsgenotype":"Wild Type ","a100026protocolref":"P-MTAB-3322","a100027parametervaluesamplepreservationmethod":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/MESH/D000096\" title=\"A colorless liquid used as a solvent and an antiseptic. It is one of the ketone bodies produced during ketoacidosis. 2-Propanone\" source=\"MESH\">Acetone </a>","a100030commentoriginalsubmittedsamplename":"RMarco_Droso_82.CEL","a100031characteristicsbiosourcetype":"freeze_dried_sample "},{"a100000sourcename":"RMarco_Droso_91.CEL","a100001samplename":"Dmel_OR_wo_RPoM_0G_no-cold_Rep1_91","a100002characteristicsorganism":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/NCBITAXON/7227\" title=\"Sophophora melanogaster\" source=\"NCBITAXON\">Drosophila melanogaster </a>","a100005characteristicsstrain":"Oregon-R ","a100008characteristicsdevelopmentalstage":"<a target=\"_blank\" href=\"http://purl.obolibrary.org/obo/UBERON_0003143\" title=\"An organism at the pupal stage. A life cycle stage of holometabolous insects in which the organism is a pupa and starts with the larval-pupal apolysis and ends with pupal-adult apolysis. chrysalides, aurelia, chrysalis, pupae\" source=\"EFO\">pupa </a>","a100011factorvaluespaceflight":"Not Applicable ","a100014factorvaluealteredgravity":"uG with random positioning machine ","a100017factorvaluealteredgravitysimulator":"RPM ","a100020factorvaluetreatment":"no cold treatment ","a100023characteristicsgenotype":"Wild Type ","a100026protocolref":"P-MTAB-3322","a100027parametervaluesamplepreservationmethod":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/MESH/D000096\" title=\"A colorless liquid used as a solvent and an antiseptic. It is one of the ketone bodies produced during ketoacidosis. 2-Propanone\" source=\"MESH\">Acetone </a>","a100030commentoriginalsubmittedsamplename":"RMarco_Droso_91.CEL","a100031characteristicsbiosourcetype":"freeze_dried_sample "},{"a100000sourcename":"RMarco_Droso_92.CEL","a100001samplename":"Dmel_OR_wo_RPoM_0G_no-cold_Rep2_92","a100002characteristicsorganism":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/NCBITAXON/7227\" title=\"Sophophora melanogaster\" source=\"NCBITAXON\">Drosophila melanogaster </a>","a100005characteristicsstrain":"Oregon-R ","a100008characteristicsdevelopmentalstage":"<a target=\"_blank\" href=\"http://purl.obolibrary.org/obo/UBERON_0003143\" title=\"An organism at the pupal stage. A life cycle stage of holometabolous insects in which the organism is a pupa and starts with the larval-pupal apolysis and ends with pupal-adult apolysis. chrysalides, aurelia, chrysalis, pupae\" source=\"EFO\">pupa </a>","a100011factorvaluespaceflight":"Not Applicable ","a100014factorvaluealteredgravity":"uG with random positioning machine ","a100017factorvaluealteredgravitysimulator":"RPM ","a100020factorvaluetreatment":"no cold treatment ","a100023characteristicsgenotype":"Wild Type ","a100026protocolref":"P-MTAB-3322","a100027parametervaluesamplepreservationmethod":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/MESH/D000096\" title=\"A colorless liquid used as a solvent and an antiseptic. It is one of the ketone bodies produced during ketoacidosis. 2-Propanone\" source=\"MESH\">Acetone </a>","a100030commentoriginalsubmittedsamplename":"RMarco_Droso_92.CEL","a100031characteristicsbiosourcetype":"freeze_dried_sample "},{"a100000sourcename":"RMarco_Droso_101.CEL","a100001samplename":"Dmel_OR_wo_RPoM_0G_no-cold_Rep3_101","a100002characteristicsorganism":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/NCBITAXON/7227\" title=\"Sophophora melanogaster\" source=\"NCBITAXON\">Drosophila melanogaster </a>","a100005characteristicsstrain":"Oregon-R ","a100008characteristicsdevelopmentalstage":"<a target=\"_blank\" href=\"http://purl.obolibrary.org/obo/UBERON_0003143\" title=\"An organism at the pupal stage. A life cycle stage of holometabolous insects in which the organism is a pupa and starts with the larval-pupal apolysis and ends with pupal-adult apolysis. chrysalides, aurelia, chrysalis, pupae\" source=\"EFO\">pupa </a>","a100011factorvaluespaceflight":"Not Applicable ","a100014factorvaluealteredgravity":"uG with random positioning machine ","a100017factorvaluealteredgravitysimulator":"RPM ","a100020factorvaluetreatment":"no cold treatment ","a100023characteristicsgenotype":"Wild Type ","a100026protocolref":"P-MTAB-3322","a100027parametervaluesamplepreservationmethod":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/MESH/D000096\" title=\"A colorless liquid used as a solvent and an antiseptic. It is one of the ketone bodies produced during ketoacidosis. 2-Propanone\" source=\"MESH\">Acetone </a>","a100030commentoriginalsubmittedsamplename":"RMarco_Droso_101.CEL","a100031characteristicsbiosourcetype":"freeze_dried_sample "},{"a100000sourcename":"RMarco_Droso_112.CEL","a100001samplename":"Dmel_OR_wo_RPoM_1G_no-cold_Rep1_112","a100002characteristicsorganism":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/NCBITAXON/7227\" title=\"Sophophora melanogaster\" source=\"NCBITAXON\">Drosophila melanogaster </a>","a100005characteristicsstrain":"Oregon-R ","a100008characteristicsdevelopmentalstage":"<a target=\"_blank\" href=\"http://purl.obolibrary.org/obo/UBERON_0003143\" title=\"An organism at the pupal stage. A life cycle stage of holometabolous insects in which the organism is a pupa and starts with the larval-pupal apolysis and ends with pupal-adult apolysis. chrysalides, aurelia, chrysalis, pupae\" source=\"EFO\">pupa </a>","a100011factorvaluespaceflight":"Not Applicable ","a100014factorvaluealteredgravity":"1G on Earth ","a100017factorvaluealteredgravitysimulator":"RPM ","a100020factorvaluetreatment":"no cold treatment ","a100023characteristicsgenotype":"Wild Type ","a100026protocolref":"P-MTAB-3322","a100027parametervaluesamplepreservationmethod":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/MESH/D000096\" title=\"A colorless liquid used as a solvent and an antiseptic. It is one of the ketone bodies produced during ketoacidosis. 2-Propanone\" source=\"MESH\">Acetone </a>","a100030commentoriginalsubmittedsamplename":"RMarco_Droso_112.CEL","a100031characteristicsbiosourcetype":"freeze_dried_sample "},{"a100000sourcename":"RMarco_Droso_121.CEL","a100001samplename":"Dmel_OR_wo_RPoM_1G_no-cold_Rep2_121","a100002characteristicsorganism":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/NCBITAXON/7227\" title=\"Sophophora melanogaster\" source=\"NCBITAXON\">Drosophila melanogaster </a>","a100005characteristicsstrain":"Oregon-R ","a100008characteristicsdevelopmentalstage":"<a target=\"_blank\" href=\"http://purl.obolibrary.org/obo/UBERON_0003143\" title=\"An organism at the pupal stage. A life cycle stage of holometabolous insects in which the organism is a pupa and starts with the larval-pupal apolysis and ends with pupal-adult apolysis. chrysalides, aurelia, chrysalis, pupae\" source=\"EFO\">pupa </a>","a100011factorvaluespaceflight":"Not Applicable ","a100014factorvaluealteredgravity":"1G on Earth ","a100017factorvaluealteredgravitysimulator":"RPM ","a100020factorvaluetreatment":"no cold treatment ","a100023characteristicsgenotype":"Wild Type ","a100026protocolref":"P-MTAB-3322","a100027parametervaluesamplepreservationmethod":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/MESH/D000096\" title=\"A colorless liquid used as a solvent and an antiseptic. It is one of the ketone bodies produced during ketoacidosis. 2-Propanone\" source=\"MESH\">Acetone </a>","a100030commentoriginalsubmittedsamplename":"RMarco_Droso_121.CEL","a100031characteristicsbiosourcetype":"freeze_dried_sample "},{"a100000sourcename":"RMarco_Droso_122.CEL","a100001samplename":"Dmel_OR_wo_RPoM_1G_no-cold_Rep3_122","a100002characteristicsorganism":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/NCBITAXON/7227\" title=\"Sophophora melanogaster\" source=\"NCBITAXON\">Drosophila melanogaster </a>","a100005characteristicsstrain":"Oregon-R ","a100008characteristicsdevelopmentalstage":"<a target=\"_blank\" href=\"http://purl.obolibrary.org/obo/UBERON_0003143\" title=\"An organism at the pupal stage. A life cycle stage of holometabolous insects in which the organism is a pupa and starts with the larval-pupal apolysis and ends with pupal-adult apolysis. chrysalides, aurelia, chrysalis, pupae\" source=\"EFO\">pupa </a>","a100011factorvaluespaceflight":"Not Applicable ","a100014factorvaluealteredgravity":"1G on Earth ","a100017factorvaluealteredgravitysimulator":"RPM ","a100020factorvaluetreatment":"no cold treatment ","a100023characteristicsgenotype":"Wild Type ","a100026protocolref":"P-MTAB-3322","a100027parametervaluesamplepreservationmethod":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/MESH/D000096\" title=\"A colorless liquid used as a solvent and an antiseptic. It is one of the ketone bodies produced during ketoacidosis. 2-Propanone\" source=\"MESH\">Acetone </a>","a100030commentoriginalsubmittedsamplename":"RMarco_Droso_122.CEL","a100031characteristicsbiosourcetype":"freeze_dried_sample "},{"a100000sourcename":"RMarco_Droso_C1.CEL","a100001samplename":"Dmel_OR_wo_MCC_1G_no-cold_Rep1_C1","a100002characteristicsorganism":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/NCBITAXON/7227\" title=\"Sophophora melanogaster\" source=\"NCBITAXON\">Drosophila melanogaster </a>","a100005characteristicsstrain":"Oregon-R ","a100008characteristicsdevelopmentalstage":"<a target=\"_blank\" href=\"http://purl.obolibrary.org/obo/UBERON_0003143\" title=\"An organism at the pupal stage. A life cycle stage of holometabolous insects in which the organism is a pupa and starts with the larval-pupal apolysis and ends with pupal-adult apolysis. chrysalides, aurelia, chrysalis, pupae\" source=\"EFO\">pupa </a>","a100011factorvaluespaceflight":"Not Applicable ","a100014factorvaluealteredgravity":"1G on Earth ","a100017factorvaluealteredgravitysimulator":"MidiCAR centrifuge ","a100020factorvaluetreatment":"no cold treatment ","a100023characteristicsgenotype":"Wild Type ","a100026protocolref":"P-MTAB-3322","a100027parametervaluesamplepreservationmethod":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/MESH/D000096\" title=\"A colorless liquid used as a solvent and an antiseptic. It is one of the ketone bodies produced during ketoacidosis. 2-Propanone\" source=\"MESH\">Acetone </a>","a100030commentoriginalsubmittedsamplename":"RMarco_Droso_C1.CEL","a100031characteristicsbiosourcetype":"freeze_dried_sample "},{"a100000sourcename":"RMarco_Droso_F1.CEL","a100001samplename":"Dmel_OR_wo_MCC_1G_no-cold_Rep2_F1","a100002characteristicsorganism":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/NCBITAXON/7227\" title=\"Sophophora melanogaster\" source=\"NCBITAXON\">Drosophila melanogaster </a>","a100005characteristicsstrain":"Oregon-R ","a100008characteristicsdevelopmentalstage":"<a target=\"_blank\" href=\"http://purl.obolibrary.org/obo/UBERON_0003143\" title=\"An organism at the pupal stage. A life cycle stage of holometabolous insects in which the organism is a pupa and starts with the larval-pupal apolysis and ends with pupal-adult apolysis. chrysalides, aurelia, chrysalis, pupae\" source=\"EFO\">pupa </a>","a100011factorvaluespaceflight":"Not Applicable ","a100014factorvaluealteredgravity":"1G on Earth ","a100017factorvaluealteredgravitysimulator":"MidiCAR centrifuge ","a100020factorvaluetreatment":"no cold treatment ","a100023characteristicsgenotype":"Wild Type ","a100026protocolref":"P-MTAB-3322","a100027parametervaluesamplepreservationmethod":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/MESH/D000096\" title=\"A colorless liquid used as a solvent and an antiseptic. It is one of the ketone bodies produced during ketoacidosis. 2-Propanone\" source=\"MESH\">Acetone </a>","a100030commentoriginalsubmittedsamplename":"RMarco_Droso_F1.CEL","a100031characteristicsbiosourcetype":"freeze_dried_sample "},{"a100000sourcename":"RMarco_Droso_F2.CEL","a100001samplename":"Dmel_OR_wo_MCC_1G_no-cold_Rep3_F2","a100002characteristicsorganism":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/NCBITAXON/7227\" title=\"Sophophora melanogaster\" source=\"NCBITAXON\">Drosophila melanogaster </a>","a100005characteristicsstrain":"Oregon-R ","a100008characteristicsdevelopmentalstage":"<a target=\"_blank\" href=\"http://purl.obolibrary.org/obo/UBERON_0003143\" title=\"An organism at the pupal stage. A life cycle stage of holometabolous insects in which the organism is a pupa and starts with the larval-pupal apolysis and ends with pupal-adult apolysis. chrysalides, aurelia, chrysalis, pupae\" source=\"EFO\">pupa </a>","a100011factorvaluespaceflight":"Not Applicable ","a100014factorvaluealteredgravity":"1G on Earth ","a100017factorvaluealteredgravitysimulator":"MidiCAR centrifuge ","a100020factorvaluetreatment":"no cold treatment ","a100023characteristicsgenotype":"Wild Type ","a100026protocolref":"P-MTAB-3322","a100027parametervaluesamplepreservationmethod":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/MESH/D000096\" title=\"A colorless liquid used as a solvent and an antiseptic. It is one of the ketone bodies produced during ketoacidosis. 2-Propanone\" source=\"MESH\">Acetone </a>","a100030commentoriginalsubmittedsamplename":"RMarco_Droso_F2.CEL","a100031characteristicsbiosourcetype":"freeze_dried_sample "},{"a100000sourcename":"RMarco_Droso_D1.CEL","a100001samplename":"Dmel_OR_wo_MCC_10G_no-cold_Rep1_D1","a100002characteristicsorganism":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/NCBITAXON/7227\" title=\"Sophophora melanogaster\" source=\"NCBITAXON\">Drosophila melanogaster </a>","a100005characteristicsstrain":"Oregon-R ","a100008characteristicsdevelopmentalstage":"<a target=\"_blank\" href=\"http://purl.obolibrary.org/obo/UBERON_0003143\" title=\"An organism at the pupal stage. A life cycle stage of holometabolous insects in which the organism is a pupa and starts with the larval-pupal apolysis and ends with pupal-adult apolysis. chrysalides, aurelia, chrysalis, pupae\" source=\"EFO\">pupa </a>","a100011factorvaluespaceflight":"Not Applicable ","a100014factorvaluealteredgravity":"10G with centrifugation ","a100017factorvaluealteredgravitysimulator":"MidiCAR centrifuge ","a100020factorvaluetreatment":"no cold treatment ","a100023characteristicsgenotype":"Wild Type ","a100026protocolref":"P-MTAB-3322","a100027parametervaluesamplepreservationmethod":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/MESH/D000096\" title=\"A colorless liquid used as a solvent and an antiseptic. It is one of the ketone bodies produced during ketoacidosis. 2-Propanone\" source=\"MESH\">Acetone </a>","a100030commentoriginalsubmittedsamplename":"RMarco_Droso_D1.CEL","a100031characteristicsbiosourcetype":"freeze_dried_sample "},{"a100000sourcename":"RMarco_Droso_D2.CEL","a100001samplename":"Dmel_OR_wo_MCC_10G_no-cold_Rep2_D2","a100002characteristicsorganism":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/NCBITAXON/7227\" title=\"Sophophora melanogaster\" source=\"NCBITAXON\">Drosophila melanogaster </a>","a100005characteristicsstrain":"Oregon-R ","a100008characteristicsdevelopmentalstage":"<a target=\"_blank\" href=\"http://purl.obolibrary.org/obo/UBERON_0003143\" title=\"An organism at the pupal stage. A life cycle stage of holometabolous insects in which the organism is a pupa and starts with the larval-pupal apolysis and ends with pupal-adult apolysis. chrysalides, aurelia, chrysalis, pupae\" source=\"EFO\">pupa </a>","a100011factorvaluespaceflight":"Not Applicable ","a100014factorvaluealteredgravity":"10G with centrifugation ","a100017factorvaluealteredgravitysimulator":"MidiCAR centrifuge ","a100020factorvaluetreatment":"no cold treatment ","a100023characteristicsgenotype":"Wild Type ","a100026protocolref":"P-MTAB-3322","a100027parametervaluesamplepreservationmethod":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/MESH/D000096\" title=\"A colorless liquid used as a solvent and an antiseptic. It is one of the ketone bodies produced during ketoacidosis. 2-Propanone\" source=\"MESH\">Acetone </a>","a100030commentoriginalsubmittedsamplename":"RMarco_Droso_D2.CEL","a100031characteristicsbiosourcetype":"freeze_dried_sample "},{"a100000sourcename":"RMarco_Droso_E2.CEL","a100001samplename":"Dmel_OR_wo_MCC_10G_no-cold_Rep3_D3","a100002characteristicsorganism":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/NCBITAXON/7227\" title=\"Sophophora melanogaster\" source=\"NCBITAXON\">Drosophila melanogaster </a>","a100005characteristicsstrain":"Oregon-R ","a100008characteristicsdevelopmentalstage":"<a target=\"_blank\" href=\"http://purl.obolibrary.org/obo/UBERON_0003143\" title=\"An organism at the pupal stage. A life cycle stage of holometabolous insects in which the organism is a pupa and starts with the larval-pupal apolysis and ends with pupal-adult apolysis. chrysalides, aurelia, chrysalis, pupae\" source=\"EFO\">pupa </a>","a100011factorvaluespaceflight":"Not Applicable ","a100014factorvaluealteredgravity":"10G with centrifugation ","a100017factorvaluealteredgravitysimulator":"MidiCAR centrifuge ","a100020factorvaluetreatment":"no cold treatment ","a100023characteristicsgenotype":"Wild Type ","a100026protocolref":"P-MTAB-3322","a100027parametervaluesamplepreservationmethod":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/MESH/D000096\" title=\"A colorless liquid used as a solvent and an antiseptic. It is one of the ketone bodies produced during ketoacidosis. 2-Propanone\" source=\"MESH\">Acetone </a>","a100030commentoriginalsubmittedsamplename":"RMarco_Droso_E2.CEL","a100031characteristicsbiosourcetype":"freeze_dried_sample "},{"a100000sourcename":"Rmarco_Droso_FG1.CEL","a100001samplename":"Dmel_OR_wo_FLT_uG_cold_Rep1_FG1","a100002characteristicsorganism":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/NCBITAXON/7227\" title=\"Sophophora melanogaster\" source=\"NCBITAXON\">Drosophila melanogaster </a>","a100005characteristicsstrain":"Oregon-R ","a100008characteristicsdevelopmentalstage":"<a target=\"_blank\" href=\"http://purl.obolibrary.org/obo/UBERON_0003143\" title=\"An organism at the pupal stage. A life cycle stage of holometabolous insects in which the organism is a pupa and starts with the larval-pupal apolysis and ends with pupal-adult apolysis. chrysalides, aurelia, chrysalis, pupae\" source=\"EFO\">pupa </a>","a100011factorvaluespaceflight":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/MESH/D013026\" title=\"Travel beyond the earth&#x27;s atmosphere. Space Travels, Flights, Space, Flight, Space, Space Travel, Spaceflight, Space Explorations, Travels, Space, Space Exploration, Space Flights, Explorations, Space, Travel, Space, Spaceflights, Exploration, Space\" source=\"MESH\">Space Flight </a>","a100014factorvaluealteredgravity":"uG ","a100017factorvaluealteredgravitysimulator":"Not Applicable ","a100020factorvaluetreatment":"cold treatment ","a100023characteristicsgenotype":"Wild Type ","a100026protocolref":"P-MTAB-3322","a100027parametervaluesamplepreservationmethod":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/MESH/D000096\" title=\"A colorless liquid used as a solvent and an antiseptic. It is one of the ketone bodies produced during ketoacidosis. 2-Propanone\" source=\"MESH\">Acetone </a>","a100030commentoriginalsubmittedsamplename":"RMarco_Droso_FG1.CEL","a100031characteristicsbiosourcetype":"freeze_dried_sample "},{"a100000sourcename":"RMarco_Droso_FG3.CEL","a100001samplename":"Dmel_OR_wo_FLT_uG_cold_Rep2_FG3","a100002characteristicsorganism":"<a target=\"_blank\" href=\"http://purl.bioontology.org/ontology/NCBITAXON/7227\" title=\"Sophophora melanogaster\" source=\"NCBITAXON\">Drosophila melanogaster </a>","a100005characteristicsstrain":"Oregon-R ","a100008characteristicsdevelopmentalstage":"<a target=\"_blank\" href=\"http://purl.obolibrary.org/obo/UBERON_0003143\" title=\"An organism at the pupal stage. 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like to recognize the European and Russian space agencies for supporting our experiment during the Cervantes Soyuz mission, particularly to the skilful work of the ESA astronaut Pedro Duque in the ISS. We also thank Mrs. Aida Villa (IIB-UAM, Madrid, Spain) and Mrs. Brigitte Eche (GSBMS-CNES, Toulouse, France) for excellent technical assistance in the ground experiments. The supply of MAMBAs is acknowledged to Dutch Space B.V. (Leiden, The Netherlands). The ESA personnel at ESTEC (Noordwijk, The Netherlands) were of great help in the preparation of the ISS Mission; in particular, we thank Mr. Jes\u02d9s Jim\u00c8nez, Ms. Natalie Pottier and Mr. Fabrizio Festa, as well as Dr. Didier Chaput (CNES, Toulouse, France). Last but not least, we want to express our gratitude to Prof. Ebberhard Horn, Prof. John Sparrow, Prof. Rob Knight, Dr. Richard Hill and the anonymous referees for their helpful and inspiring review of this article manuscript."},{"name":"DOI","value":"10.25966/a7vj-4s55"},{"name":"Data Source Accession","value":"E-MEXP-2064"},{"name":"Data Source Link","value":"http://www.ebi.ac.uk/arrayexpress/experiments/E-MEXP-2064/"},{"name":"Experiment Platform","value":""},{"name":"Flight Program","value":"International Space Station (ISS)"},{"name":"Funding","value":"This work was supported by grants from the Spanish Space Program in the 'Plan Nacional de Investigacion Cientifica y Desarrollo Tecnologico' [ESP2001-4522-PE and ESP2006-13600-C02-01 to Marco and ESP2006-13600-C02-02 to Medina] and the Dutch NWO-ALW-SRON grant [MG-057 to van Loon]. R. Herranz during the Cervantes mission and D. Lavan during the post-flight analysis were supported by Spanish Ministerio de Educacion y Ciencia within the FPI fellowship program."},{"name":"Identifiers","value":""},{"name":"Managing NASA Center","value":""},{"name":"Mission End","value":"10/28/2003, 04/30/2004"},{"name":"Mission Link","value":"https://osdr.nasa.gov/bio/repo/data/missions/Soyuz TMA-2, https://osdr.nasa.gov/bio/repo/data/missions/Soyuz TMA-3"},{"name":"Mission Name","value":"Soyuz TMA-2, Soyuz TMA-3"},{"name":"Mission Start","value":"04/26/2003, 10/18/2003"},{"name":"Project Identifier","value":"GENE"},{"name":"Project Link","value":"https://digital.csic.es/bitstream/10261/22008/1/Ref12-Herranz2007_edited.pdf"},{"name":"Project Title","value":"The \u201cGene\u201d Experiment in the Spanish Soyuz Mission to the ISS. Effects of the cold transportation step"},{"name":"Project Type","value":"Spaceflight Study"},{"name":"Space Program","value":"ESA"},{"name":"Study Funding Agency","value":"ESA"},{"name":"Study Grant Number","value":"This work was supported by grants from the Spanish Space Program in the 'Plan Nacional de Investigacion Cientifica y Desarrollo Tecnologico' [ESP2001-4522-PE and ESP2006-13600-C02-01 to Marco and ESP2006-13600-C02-02 to Medina] and the Dutch NWO-ALW-SRON grant [MG-057 to van Loon]. R. Herranz during the Cervantes mission and D. Lavan during the post-flight analysis were supported by Spanish Ministerio de Educacion y Ciencia within the FPI fellowship program."}],"description":"Larvae-Pupae transition flies (Drosophila) were recovered and transport for 3 days at 12-14C to arrest development until the launch site, then exposed to RT (18-20C) for some hours including the launch and trip to the International Space Station, then pupae were exposed to microgravity in the ISS for 4 days and a half at 22C. Finally pupae were fixed on acetone and frozen until recovery on Earth. 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In short, a RunSheet containing raw data file location and processing metadata from the study's *ISA.zip file was generated using dp_tools (version 1.3.4). The raw array data files were loaded into R (version 4.1.3) using oligo (version 1.58.0). Raw data quality assurance density plot, pseudo images, MA plots, and boxplots were generated using oligo (version 1.58.0). The raw probe level intensity data was background corrected and normalized across arrays via the oligo (version 1.58.0) quantile method. Normalized probe level data quality assurance density plot, pseudo images, MA plots, and boxplots were generated using oligo (version 1.58.0). Normalized probe level data was summarized to the probeset level using the oligo (version 1.58.0) RMA method. Ensembl gene ID mappings were retrieved for each probeset using biomaRt (version 2.50.0), Ensembl database (ensembl.org, release 107). Differential expression analysis was performed in R (version 4.1.3) using limma (version 3.50.3); all groups were compared pairwise for each probeset to generate a moderated t-statistic and associated p- and adjusted p-value. Gene annotations were assigned for every probeset that mapped to exactly one Ensembl gene ID using the custom annotation tables generated in-house as detailed in GL-DPPD-7110 (<a href=\"https://github.com/nasa/GeneLab_Data_Processing/blob/GL_RefAnnotTable_1.0.0/GeneLab_Reference_Annotations/Pipeline_GL-DPPD-7110_Versions/GL-DPPD-7110/GL-DPPD-7110.md\" target=\"_\" >https://github.com/nasa/GeneLab_Data_Processing/blob/GL_RefAnnotTable_1.0.0/GeneLab_Reference_Annotations/Pipeline_GL-DPPD-7110_Versions/GL-DPPD-7110/GL-DPPD-7110.md</a>), with STRINGdb (version 2.8.4), PANTHER.db (version 1.0.11), and org.Dm.eg.db (version 3.15.0).","name":"GeneLab microarray data processing protocol","parameters":[{"@id":"#140020781892320","parameterName":{"@id":"K118AXUyIEG1ZYS51uguXcjP8ntWEkDmw8vHFKwv","annotationValue":"Raw Intensities Table","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"@id":"#140020781892080","parameterName":{"@id":"RpH2RFEgfhHH505JAZKmbs1qSQxqTEWunuvVxI6T","annotationValue":"Normalized Expression Table","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"@id":"#140020781892560","parameterName":{"@id":"c4UoiNar4sA4ty0VawH08rhaf4AR7F8drWBP91tt","annotationValue":"differential expression analysis data","comments":[],"termAccession":"http://purl.obolibrary.org/obo/OBI_0002584","termSource":"OBI"}}],"protocolType":{"@id":"gHRCpX8ZCZrvMb1jv0PpSihU4DurynDUUnkOSfet","annotationValue":"data transformation","comments":[],"termAccession":"http://purl.obolibrary.org/obo/OBI_0200000","termSource":"OBI"},"uri":"","version":""}],"publicReleaseDate":"01-Jul-2010","publications":[{"authorList":"Herranz R, Benguria A, Lavn DA, Lopez-Vidriero I, Gasset G, Javier Medina F, van Loon JJ, Marco R.","comments":[],"doi":"10.1111/j.1365-294X.2010.04795.x","pubMedID":"20819157","status":{"@id":"LmdAvi3HYaAIgsfwpY1sWHGrDR5sHm3luQJDg1Ay","annotationValue":"published","comments":[],"termAccession":"http://www.ebi.ac.uk/efo/EFO_0001796","termSource":"EFO"},"title":"Spaceflight-related suboptimal conditions can accentuate\nthe altered gravity response of Drosophila transcriptome."}],"studyDesignDescriptors":[{"@id":"h0shfCKjUqWbQbBHH9iZLu4lX5tHwbttyXVJiTw5","annotationValue":"transcription profiling by array","comments":[],"termAccession":"http://www.ebi.ac.uk/efo/EFO_0002768","termSource":"EFO"}],"submissionDate":"18-Feb-2009","title":"Transcription profiling of Drosophila after exposure to microgravity in the International Space Station and in a microgravity simulator","unitCategories":[]}],"version":5}},"success":true}