{"hits":1,"input":"347","study":{"OSD-347":{"comments":[],"ontologySourceReferences":[{"comments":[],"description":"Medical Subject Headings","file":"http://data.bioontology.org/ontologies/MESH","name":"MESH","version":"13"},{"comments":[],"description":"Foundational Model of Anatomy","file":"http://data.bioontology.org/ontologies/FMA","name":"FMA","version":"22"},{"comments":[],"description":"Ontology for Biomedical Investigations","file":"http://data.bioontology.org/ontologies/OBI","name":"OBI","version":"32"},{"comments":[],"description":"Experimental Factor Ontology","file":"http://data.bioontology.org/ontologies/EFO","name":"EFO","version":"132"},{"comments":[],"description":"National Cancer Institute Thesaurus","file":"http://data.bioontology.org/ontologies/NCIT","name":"NCIT","version":"52"},{"comments":[],"description":"National Center for Biotechnology Information (NCBI) Organismal Classification","file":"http://data.bioontology.org/ontologies/NCBITAXON","name":"NCBITAXON","version":"9"},{"comments":[],"description":"Sequence Types and Features Ontology","file":"http://data.bioontology.org/ontologies/SO","name":"SO","version":"229"},{"comments":[],"description":"Units of Measurement Ontology","file":"http://data.bioontology.org/ontologies/UO","name":"UO","version":"43"},{"comments":[],"description":"","file":"","name":"CRO","version":""}],"people":[],"publications":[],"studies":[{"assays":[{"characteristicCategories":[],"comments":[],"dataFiles":[{"@id":"#data/rawdatafile-140227399419600","comments":[],"name":"GLDS-347_rna-seq_Gcon1_R1.fastq.gz, GLDS-347_rna-seq_Gcon1_R2.fastq.gz","type":"Raw Data File"},{"@id":"#data/rawdatafile-140227399421904","comments":[],"name":"GLDS-347_rna-seq_Gcon2_R1.fastq.gz, GLDS-347_rna-seq_Gcon2_R2.fastq.gz","type":"Raw Data File"},{"@id":"#data/rawdatafile-140227399420176","comments":[],"name":"GLDS-347_rna-seq_Gcon3_R1.fastq.gz, GLDS-347_rna-seq_Gcon3_R2.fastq.gz","type":"Raw Data File"},{"@id":"#data/rawdatafile-140227399418592","comments":[],"name":"GLDS-347_rna-seq_Gsei1_R1.fastq.gz, GLDS-347_rna-seq_Gsei1_R2.fastq.gz","type":"Raw Data File"},{"@id":"#data/rawdatafile-140227399418496","comments":[],"name":"GLDS-347_rna-seq_Gsei2_R1.fastq.gz, GLDS-347_rna-seq_Gsei2_R2.fastq.gz","type":"Raw Data File"},{"@id":"#data/rawdatafile-140227399421520","comments":[],"name":"GLDS-347_rna-seq_Gsei3_R1.fastq.gz, GLDS-347_rna-seq_Gsei3_R2.fastq.gz","type":"Raw Data File"},{"@id":"#data/rawdatafile-140227399418304","comments":[],"name":"GLDS-347_rna-seq_Scon1_R1.fastq.gz, GLDS-347_rna-seq_Scon1_R2.fastq.gz","type":"Raw Data File"},{"@id":"#data/rawdatafile-140227399419888","comments":[],"name":"GLDS-347_rna-seq_Scon2_R1.fastq.gz, GLDS-347_rna-seq_Scon2_R2.fastq.gz","type":"Raw Data File"},{"@id":"#data/rawdatafile-140227399421472","comments":[],"name":"GLDS-347_rna-seq_Scon3_R1.fastq.gz, GLDS-347_rna-seq_Scon3_R2.fastq.gz","type":"Raw Data File"},{"@id":"#data/rawdatafile-140227399418784","comments":[],"name":"GLDS-347_rna-seq_Ssei1_R1.fastq.gz, GLDS-347_rna-seq_Ssei1_R2.fastq.gz","type":"Raw Data File"},{"@id":"#data/rawdatafile-140227399420656","comments":[],"name":"GLDS-347_rna-seq_Ssei2_R1.fastq.gz, GLDS-347_rna-seq_Ssei2_R2.fastq.gz","type":"Raw Data File"},{"@id":"#data/rawdatafile-140227399419744","comments":[],"name":"GLDS-347_rna-seq_Ssei3_R1.fastq.gz, GLDS-347_rna-seq_Ssei3_R2.fastq.gz","type":"Raw Data File"},{"@id":"#data/rawdatafile-140227399418112","comments":[],"name":"GLDS-347_rna-seq_Ssei4_R1.fastq.gz, GLDS-347_rna-seq_Ssei4_R2.fastq.gz","type":"Raw Data File"}],"filename":"a_OSD-347_transcription-profiling_rna-sequencing-(rna-seq).txt","materials":{"otherMaterials":[{"@id":"#material/extract-140227409472144","characteristics":[],"name":"CS Ground Control 1 Heart","type":"Extract Name"},{"@id":"#material/extract-140227409472240","characteristics":[],"name":"CS Ground Control 2 Heart","type":"Extract Name"},{"@id":"#material/extract-140227409469696","characteristics":[],"name":"CS Ground Control 3 Heart","type":"Extract Name"},{"@id":"#material/extract-140227409472048","characteristics":[],"name":"CS Space Flown 1 Heart","type":"Extract Name"},{"@id":"#material/extract-140227409473104","characteristics":[],"name":"CS Space Flown 2 Heart","type":"Extract Name"},{"@id":"#material/extract-140227409471808","characteristics":[],"name":"CS Space Flown 3 Heart","type":"Extract Name"},{"@id":"#material/extract-140227399420224","characteristics":[],"name":"Sei ts1 Ground Control 1 Heart","type":"Extract Name"},{"@id":"#material/extract-140227399419120","characteristics":[],"name":"Sei ts1 Ground Control 2 Heart","type":"Extract Name"},{"@id":"#material/extract-140227399420368","characteristics":[],"name":"Sei ts1 Ground Control 3 Heart","type":"Extract Name"},{"@id":"#material/extract-140227399419360","characteristics":[],"name":"Sei ts1 Space Flown 1 Heart","type":"Extract Name"},{"@id":"#material/extract-140227399419984","characteristics":[],"name":"Sei ts1 Space Flown 2 Heart","type":"Extract Name"},{"@id":"#material/extract-140227399421136","characteristics":[],"name":"Sei ts1 Space Flown 3 Heart","type":"Extract Name"},{"@id":"#material/extract-140227399419648","characteristics":[],"name":"Sei ts1 Space Flown 4 Heart","type":"Extract Name"}],"samples":[{"@id":"#sample/140227415250448","characteristics":[{"category":{"@id":"399SzhBQzExSjIr4pjc31bssabQKEbyJxfwbrlYi"},"value":{"@id":"zqKk5bdXuNyksKKxoyi9xqOA4ULpewhpat406I7I","annotationValue":"Drosophila melanogaster","comments":[],"termAccession":"http://purl.bioontology.org/ontology/NCBITAXON/7227","termSource":"NCBITAXON"}},{"category":{"@id":"ckWn7OLUT8oddpV7c5wlAhWzZKOWJ2rc9Atk6Kgv"},"value":{"@id":"3Q0UXLc3Ll28gi5Y9xsNtsjTh7VdiwL66jfmlgES","annotationValue":"Canton-S","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"category":{"@id":"KCzWlZo7KEPqFn8gM6YdlLjQ41WWXWTC5I7BYv8U"},"value":{"@id":"wYfmNXXKA89HVKoGYL5zHDatYawmSRUyCIyyPoNz","annotationValue":"Female","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D005260","termSource":"MESH"}},{"category":{"@id":"GkVM3ErqJoJzYEwMqQtm23ugJtXghhe2hrOB1p5I"},"unit":{"@id":"EN78WNpG5NZElsP9sj1OVW0TMS8NNuDr1mEzIqd2"},"value":"1 to 3"},{"category":{"@id":"49juZ4FGB57I9ooIymVnW2cIJgBOgOHjamafkg30"},"value":{"@id":"4JQIlRv4pgRkb0Kf7atvxhWUrPuqcjNxWuIzJVHu","annotationValue":"Heart","comments":[],"termAccession":"http://purl.org/sig/ont/fma/fma7088","termSource":"FMA"}}],"derivesFrom":[],"factorValues":[{"@id":"","category":{"@id":"V2XSGFfD6LJDb1O5A9sAxTihUDYIrLAJSBWJJ8s7"},"value":{"@id":"XoqDPitRzVYowUx9J8oZ2RDMXeXbRRTt4WttLvv2","annotationValue":"Wild Type","comments":[],"termAccession":"http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C62195","termSource":"NCIT"}},{"@id":"","category":{"@id":"rrAHixexWAdqOKNaj15Ezk66kWZSMcprcBRZfg1k"},"value":{"@id":"XJ2x9G5FYOhyGGbYDO0xkevuzcPxPnzdf1nFa9fv","annotationValue":"Space Flight","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D013026","termSource":"MESH"}}],"name":"CS_FLT_1"},{"@id":"#sample/140227415251504","characteristics":[{"category":{"@id":"399SzhBQzExSjIr4pjc31bssabQKEbyJxfwbrlYi"},"value":{"@id":"zqKk5bdXuNyksKKxoyi9xqOA4ULpewhpat406I7I","annotationValue":"Drosophila melanogaster","comments":[],"termAccession":"http://purl.bioontology.org/ontology/NCBITAXON/7227","termSource":"NCBITAXON"}},{"category":{"@id":"ckWn7OLUT8oddpV7c5wlAhWzZKOWJ2rc9Atk6Kgv"},"value":{"@id":"3Q0UXLc3Ll28gi5Y9xsNtsjTh7VdiwL66jfmlgES","annotationValue":"Canton-S","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"category":{"@id":"KCzWlZo7KEPqFn8gM6YdlLjQ41WWXWTC5I7BYv8U"},"value":{"@id":"wYfmNXXKA89HVKoGYL5zHDatYawmSRUyCIyyPoNz","annotationValue":"Female","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D005260","termSource":"MESH"}},{"category":{"@id":"GkVM3ErqJoJzYEwMqQtm23ugJtXghhe2hrOB1p5I"},"unit":{"@id":"EN78WNpG5NZElsP9sj1OVW0TMS8NNuDr1mEzIqd2"},"value":"1 to 3"},{"category":{"@id":"49juZ4FGB57I9ooIymVnW2cIJgBOgOHjamafkg30"},"value":{"@id":"4JQIlRv4pgRkb0Kf7atvxhWUrPuqcjNxWuIzJVHu","annotationValue":"Heart","comments":[],"termAccession":"http://purl.org/sig/ont/fma/fma7088","termSource":"FMA"}}],"derivesFrom":[],"factorValues":[{"@id":"","category":{"@id":"V2XSGFfD6LJDb1O5A9sAxTihUDYIrLAJSBWJJ8s7"},"value":{"@id":"XoqDPitRzVYowUx9J8oZ2RDMXeXbRRTt4WttLvv2","annotationValue":"Wild Type","comments":[],"termAccession":"http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C62195","termSource":"NCIT"}},{"@id":"","category":{"@id":"rrAHixexWAdqOKNaj15Ezk66kWZSMcprcBRZfg1k"},"value":{"@id":"XJ2x9G5FYOhyGGbYDO0xkevuzcPxPnzdf1nFa9fv","annotationValue":"Space Flight","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D013026","termSource":"MESH"}}],"name":"CS_FLT_2"},{"@id":"#sample/140227415251600","characteristics":[{"category":{"@id":"399SzhBQzExSjIr4pjc31bssabQKEbyJxfwbrlYi"},"value":{"@id":"zqKk5bdXuNyksKKxoyi9xqOA4ULpewhpat406I7I","annotationValue":"Drosophila melanogaster","comments":[],"termAccession":"http://purl.bioontology.org/ontology/NCBITAXON/7227","termSource":"NCBITAXON"}},{"category":{"@id":"ckWn7OLUT8oddpV7c5wlAhWzZKOWJ2rc9Atk6Kgv"},"value":{"@id":"3Q0UXLc3Ll28gi5Y9xsNtsjTh7VdiwL66jfmlgES","annotationValue":"Canton-S","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"category":{"@id":"KCzWlZo7KEPqFn8gM6YdlLjQ41WWXWTC5I7BYv8U"},"value":{"@id":"wYfmNXXKA89HVKoGYL5zHDatYawmSRUyCIyyPoNz","annotationValue":"Female","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D005260","termSource":"MESH"}},{"category":{"@id":"GkVM3ErqJoJzYEwMqQtm23ugJtXghhe2hrOB1p5I"},"unit":{"@id":"EN78WNpG5NZElsP9sj1OVW0TMS8NNuDr1mEzIqd2"},"value":"1 to 3"},{"category":{"@id":"49juZ4FGB57I9ooIymVnW2cIJgBOgOHjamafkg30"},"value":{"@id":"4JQIlRv4pgRkb0Kf7atvxhWUrPuqcjNxWuIzJVHu","annotationValue":"Heart","comments":[],"termAccession":"http://purl.org/sig/ont/fma/fma7088","termSource":"FMA"}}],"derivesFrom":[],"factorValues":[{"@id":"","category":{"@id":"V2XSGFfD6LJDb1O5A9sAxTihUDYIrLAJSBWJJ8s7"},"value":{"@id":"XoqDPitRzVYowUx9J8oZ2RDMXeXbRRTt4WttLvv2","annotationValue":"Wild Type","comments":[],"termAccession":"http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C62195","termSource":"NCIT"}},{"@id":"","category":{"@id":"rrAHixexWAdqOKNaj15Ezk66kWZSMcprcBRZfg1k"},"value":{"@id":"XJ2x9G5FYOhyGGbYDO0xkevuzcPxPnzdf1nFa9fv","annotationValue":"Space Flight","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D013026","termSource":"MESH"}}],"name":"CS_FLT_3"},{"@id":"#sample/140227415252272","characteristics":[{"category":{"@id":"399SzhBQzExSjIr4pjc31bssabQKEbyJxfwbrlYi"},"value":{"@id":"zqKk5bdXuNyksKKxoyi9xqOA4ULpewhpat406I7I","annotationValue":"Drosophila melanogaster","comments":[],"termAccession":"http://purl.bioontology.org/ontology/NCBITAXON/7227","termSource":"NCBITAXON"}},{"category":{"@id":"ckWn7OLUT8oddpV7c5wlAhWzZKOWJ2rc9Atk6Kgv"},"value":{"@id":"3Q0UXLc3Ll28gi5Y9xsNtsjTh7VdiwL66jfmlgES","annotationValue":"Canton-S","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"category":{"@id":"KCzWlZo7KEPqFn8gM6YdlLjQ41WWXWTC5I7BYv8U"},"value":{"@id":"wYfmNXXKA89HVKoGYL5zHDatYawmSRUyCIyyPoNz","annotationValue":"Female","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D005260","termSource":"MESH"}},{"category":{"@id":"GkVM3ErqJoJzYEwMqQtm23ugJtXghhe2hrOB1p5I"},"unit":{"@id":"EN78WNpG5NZElsP9sj1OVW0TMS8NNuDr1mEzIqd2"},"value":"1 to 3"},{"category":{"@id":"49juZ4FGB57I9ooIymVnW2cIJgBOgOHjamafkg30"},"value":{"@id":"4JQIlRv4pgRkb0Kf7atvxhWUrPuqcjNxWuIzJVHu","annotationValue":"Heart","comments":[],"termAccession":"http://purl.org/sig/ont/fma/fma7088","termSource":"FMA"}}],"derivesFrom":[],"factorValues":[{"@id":"","category":{"@id":"V2XSGFfD6LJDb1O5A9sAxTihUDYIrLAJSBWJJ8s7"},"value":{"@id":"XoqDPitRzVYowUx9J8oZ2RDMXeXbRRTt4WttLvv2","annotationValue":"Wild Type","comments":[],"termAccession":"http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C62195","termSource":"NCIT"}},{"@id":"","category":{"@id":"rrAHixexWAdqOKNaj15Ezk66kWZSMcprcBRZfg1k"},"value":{"@id":"uSz5i4QBr7uZce9ezDEYPeTPfWANK23t9aUzRnAy","annotationValue":"Ground Control","comments":[],"termAccession":"","termSource":""}}],"name":"CS_GC_1"},{"@id":"#sample/140227415251312","characteristics":[{"category":{"@id":"399SzhBQzExSjIr4pjc31bssabQKEbyJxfwbrlYi"},"value":{"@id":"zqKk5bdXuNyksKKxoyi9xqOA4ULpewhpat406I7I","annotationValue":"Drosophila melanogaster","comments":[],"termAccession":"http://purl.bioontology.org/ontology/NCBITAXON/7227","termSource":"NCBITAXON"}},{"category":{"@id":"ckWn7OLUT8oddpV7c5wlAhWzZKOWJ2rc9Atk6Kgv"},"value":{"@id":"3Q0UXLc3Ll28gi5Y9xsNtsjTh7VdiwL66jfmlgES","annotationValue":"Canton-S","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"category":{"@id":"KCzWlZo7KEPqFn8gM6YdlLjQ41WWXWTC5I7BYv8U"},"value":{"@id":"wYfmNXXKA89HVKoGYL5zHDatYawmSRUyCIyyPoNz","annotationValue":"Female","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D005260","termSource":"MESH"}},{"category":{"@id":"GkVM3ErqJoJzYEwMqQtm23ugJtXghhe2hrOB1p5I"},"unit":{"@id":"EN78WNpG5NZElsP9sj1OVW0TMS8NNuDr1mEzIqd2"},"value":"1 to 3"},{"category":{"@id":"49juZ4FGB57I9ooIymVnW2cIJgBOgOHjamafkg30"},"value":{"@id":"4JQIlRv4pgRkb0Kf7atvxhWUrPuqcjNxWuIzJVHu","annotationValue":"Heart","comments":[],"termAccession":"http://purl.org/sig/ont/fma/fma7088","termSource":"FMA"}}],"derivesFrom":[],"factorValues":[{"@id":"","category":{"@id":"V2XSGFfD6LJDb1O5A9sAxTihUDYIrLAJSBWJJ8s7"},"value":{"@id":"XoqDPitRzVYowUx9J8oZ2RDMXeXbRRTt4WttLvv2","annotationValue":"Wild Type","comments":[],"termAccession":"http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C62195","termSource":"NCIT"}},{"@id":"","category":{"@id":"rrAHixexWAdqOKNaj15Ezk66kWZSMcprcBRZfg1k"},"value":{"@id":"uSz5i4QBr7uZce9ezDEYPeTPfWANK23t9aUzRnAy","annotationValue":"Ground Control","comments":[],"termAccession":"","termSource":""}}],"name":"CS_GC_2"},{"@id":"#sample/140227415251744","characteristics":[{"category":{"@id":"399SzhBQzExSjIr4pjc31bssabQKEbyJxfwbrlYi"},"value":{"@id":"zqKk5bdXuNyksKKxoyi9xqOA4ULpewhpat406I7I","annotationValue":"Drosophila melanogaster","comments":[],"termAccession":"http://purl.bioontology.org/ontology/NCBITAXON/7227","termSource":"NCBITAXON"}},{"category":{"@id":"ckWn7OLUT8oddpV7c5wlAhWzZKOWJ2rc9Atk6Kgv"},"value":{"@id":"3Q0UXLc3Ll28gi5Y9xsNtsjTh7VdiwL66jfmlgES","annotationValue":"Canton-S","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"category":{"@id":"KCzWlZo7KEPqFn8gM6YdlLjQ41WWXWTC5I7BYv8U"},"value":{"@id":"wYfmNXXKA89HVKoGYL5zHDatYawmSRUyCIyyPoNz","annotationValue":"Female","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D005260","termSource":"MESH"}},{"category":{"@id":"GkVM3ErqJoJzYEwMqQtm23ugJtXghhe2hrOB1p5I"},"unit":{"@id":"EN78WNpG5NZElsP9sj1OVW0TMS8NNuDr1mEzIqd2"},"value":"1 to 3"},{"category":{"@id":"49juZ4FGB57I9ooIymVnW2cIJgBOgOHjamafkg30"},"value":{"@id":"4JQIlRv4pgRkb0Kf7atvxhWUrPuqcjNxWuIzJVHu","annotationValue":"Heart","comments":[],"termAccession":"http://purl.org/sig/ont/fma/fma7088","termSource":"FMA"}}],"derivesFrom":[],"factorValues":[{"@id":"","category":{"@id":"V2XSGFfD6LJDb1O5A9sAxTihUDYIrLAJSBWJJ8s7"},"value":{"@id":"XoqDPitRzVYowUx9J8oZ2RDMXeXbRRTt4WttLvv2","annotationValue":"Wild Type","comments":[],"termAccession":"http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C62195","termSource":"NCIT"}},{"@id":"","category":{"@id":"rrAHixexWAdqOKNaj15Ezk66kWZSMcprcBRZfg1k"},"value":{"@id":"uSz5i4QBr7uZce9ezDEYPeTPfWANK23t9aUzRnAy","annotationValue":"Ground Control","comments":[],"termAccession":"","termSource":""}}],"name":"CS_GC_3"},{"@id":"#sample/140227415252032","characteristics":[{"category":{"@id":"399SzhBQzExSjIr4pjc31bssabQKEbyJxfwbrlYi"},"value":{"@id":"zqKk5bdXuNyksKKxoyi9xqOA4ULpewhpat406I7I","annotationValue":"Drosophila melanogaster","comments":[],"termAccession":"http://purl.bioontology.org/ontology/NCBITAXON/7227","termSource":"NCBITAXON"}},{"category":{"@id":"ckWn7OLUT8oddpV7c5wlAhWzZKOWJ2rc9Atk6Kgv"},"value":{"@id":"3Q0UXLc3Ll28gi5Y9xsNtsjTh7VdiwL66jfmlgES","annotationValue":"Canton-S","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"category":{"@id":"KCzWlZo7KEPqFn8gM6YdlLjQ41WWXWTC5I7BYv8U"},"value":{"@id":"wYfmNXXKA89HVKoGYL5zHDatYawmSRUyCIyyPoNz","annotationValue":"Female","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D005260","termSource":"MESH"}},{"category":{"@id":"GkVM3ErqJoJzYEwMqQtm23ugJtXghhe2hrOB1p5I"},"unit":{"@id":"EN78WNpG5NZElsP9sj1OVW0TMS8NNuDr1mEzIqd2"},"value":"1 to 3"},{"category":{"@id":"49juZ4FGB57I9ooIymVnW2cIJgBOgOHjamafkg30"},"value":{"@id":"4JQIlRv4pgRkb0Kf7atvxhWUrPuqcjNxWuIzJVHu","annotationValue":"Heart","comments":[],"termAccession":"http://purl.org/sig/ont/fma/fma7088","termSource":"FMA"}}],"derivesFrom":[],"factorValues":[{"@id":"","category":{"@id":"V2XSGFfD6LJDb1O5A9sAxTihUDYIrLAJSBWJJ8s7"},"value":{"@id":"MoW5dNuCkN09ArHzdIy2yGa5bL5oyO1zVhBUP6yS","annotationValue":"seizure channel mutant","comments":[],"termAccession":"","termSource":""}},{"@id":"","category":{"@id":"rrAHixexWAdqOKNaj15Ezk66kWZSMcprcBRZfg1k"},"value":{"@id":"XJ2x9G5FYOhyGGbYDO0xkevuzcPxPnzdf1nFa9fv","annotationValue":"Space Flight","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D013026","termSource":"MESH"}}],"name":"Seits1_FLT_1"},{"@id":"#sample/140227415252800","characteristics":[{"category":{"@id":"399SzhBQzExSjIr4pjc31bssabQKEbyJxfwbrlYi"},"value":{"@id":"zqKk5bdXuNyksKKxoyi9xqOA4ULpewhpat406I7I","annotationValue":"Drosophila melanogaster","comments":[],"termAccession":"http://purl.bioontology.org/ontology/NCBITAXON/7227","termSource":"NCBITAXON"}},{"category":{"@id":"ckWn7OLUT8oddpV7c5wlAhWzZKOWJ2rc9Atk6Kgv"},"value":{"@id":"3Q0UXLc3Ll28gi5Y9xsNtsjTh7VdiwL66jfmlgES","annotationValue":"Canton-S","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"category":{"@id":"KCzWlZo7KEPqFn8gM6YdlLjQ41WWXWTC5I7BYv8U"},"value":{"@id":"wYfmNXXKA89HVKoGYL5zHDatYawmSRUyCIyyPoNz","annotationValue":"Female","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D005260","termSource":"MESH"}},{"category":{"@id":"GkVM3ErqJoJzYEwMqQtm23ugJtXghhe2hrOB1p5I"},"unit":{"@id":"EN78WNpG5NZElsP9sj1OVW0TMS8NNuDr1mEzIqd2"},"value":"1 to 3"},{"category":{"@id":"49juZ4FGB57I9ooIymVnW2cIJgBOgOHjamafkg30"},"value":{"@id":"4JQIlRv4pgRkb0Kf7atvxhWUrPuqcjNxWuIzJVHu","annotationValue":"Heart","comments":[],"termAccession":"http://purl.org/sig/ont/fma/fma7088","termSource":"FMA"}}],"derivesFrom":[],"factorValues":[{"@id":"","category":{"@id":"V2XSGFfD6LJDb1O5A9sAxTihUDYIrLAJSBWJJ8s7"},"value":{"@id":"MoW5dNuCkN09ArHzdIy2yGa5bL5oyO1zVhBUP6yS","annotationValue":"seizure channel mutant","comments":[],"termAccession":"","termSource":""}},{"@id":"","category":{"@id":"rrAHixexWAdqOKNaj15Ezk66kWZSMcprcBRZfg1k"},"value":{"@id":"XJ2x9G5FYOhyGGbYDO0xkevuzcPxPnzdf1nFa9fv","annotationValue":"Space Flight","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D013026","termSource":"MESH"}}],"name":"Seits1_FLT_2"},{"@id":"#sample/140227415249632","characteristics":[{"category":{"@id":"399SzhBQzExSjIr4pjc31bssabQKEbyJxfwbrlYi"},"value":{"@id":"zqKk5bdXuNyksKKxoyi9xqOA4ULpewhpat406I7I","annotationValue":"Drosophila melanogaster","comments":[],"termAccession":"http://purl.bioontology.org/ontology/NCBITAXON/7227","termSource":"NCBITAXON"}},{"category":{"@id":"ckWn7OLUT8oddpV7c5wlAhWzZKOWJ2rc9Atk6Kgv"},"value":{"@id":"3Q0UXLc3Ll28gi5Y9xsNtsjTh7VdiwL66jfmlgES","annotationValue":"Canton-S","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"category":{"@id":"KCzWlZo7KEPqFn8gM6YdlLjQ41WWXWTC5I7BYv8U"},"value":{"@id":"wYfmNXXKA89HVKoGYL5zHDatYawmSRUyCIyyPoNz","annotationValue":"Female","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D005260","termSource":"MESH"}},{"category":{"@id":"GkVM3ErqJoJzYEwMqQtm23ugJtXghhe2hrOB1p5I"},"unit":{"@id":"EN78WNpG5NZElsP9sj1OVW0TMS8NNuDr1mEzIqd2"},"value":"1 to 3"},{"category":{"@id":"49juZ4FGB57I9ooIymVnW2cIJgBOgOHjamafkg30"},"value":{"@id":"4JQIlRv4pgRkb0Kf7atvxhWUrPuqcjNxWuIzJVHu","annotationValue":"Heart","comments":[],"termAccession":"http://purl.org/sig/ont/fma/fma7088","termSource":"FMA"}}],"derivesFrom":[],"factorValues":[{"@id":"","category":{"@id":"V2XSGFfD6LJDb1O5A9sAxTihUDYIrLAJSBWJJ8s7"},"value":{"@id":"MoW5dNuCkN09ArHzdIy2yGa5bL5oyO1zVhBUP6yS","annotationValue":"seizure channel mutant","comments":[],"termAccession":"","termSource":""}},{"@id":"","category":{"@id":"rrAHixexWAdqOKNaj15Ezk66kWZSMcprcBRZfg1k"},"value":{"@id":"XJ2x9G5FYOhyGGbYDO0xkevuzcPxPnzdf1nFa9fv","annotationValue":"Space Flight","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D013026","termSource":"MESH"}}],"name":"Seits1_FLT_3"},{"@id":"#sample/140227415252944","characteristics":[{"category":{"@id":"399SzhBQzExSjIr4pjc31bssabQKEbyJxfwbrlYi"},"value":{"@id":"zqKk5bdXuNyksKKxoyi9xqOA4ULpewhpat406I7I","annotationValue":"Drosophila melanogaster","comments":[],"termAccession":"http://purl.bioontology.org/ontology/NCBITAXON/7227","termSource":"NCBITAXON"}},{"category":{"@id":"ckWn7OLUT8oddpV7c5wlAhWzZKOWJ2rc9Atk6Kgv"},"value":{"@id":"3Q0UXLc3Ll28gi5Y9xsNtsjTh7VdiwL66jfmlgES","annotationValue":"Canton-S","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"category":{"@id":"KCzWlZo7KEPqFn8gM6YdlLjQ41WWXWTC5I7BYv8U"},"value":{"@id":"wYfmNXXKA89HVKoGYL5zHDatYawmSRUyCIyyPoNz","annotationValue":"Female","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D005260","termSource":"MESH"}},{"category":{"@id":"GkVM3ErqJoJzYEwMqQtm23ugJtXghhe2hrOB1p5I"},"unit":{"@id":"EN78WNpG5NZElsP9sj1OVW0TMS8NNuDr1mEzIqd2"},"value":"1 to 3"},{"category":{"@id":"49juZ4FGB57I9ooIymVnW2cIJgBOgOHjamafkg30"},"value":{"@id":"4JQIlRv4pgRkb0Kf7atvxhWUrPuqcjNxWuIzJVHu","annotationValue":"Heart","comments":[],"termAccession":"http://purl.org/sig/ont/fma/fma7088","termSource":"FMA"}}],"derivesFrom":[],"factorValues":[{"@id":"","category":{"@id":"V2XSGFfD6LJDb1O5A9sAxTihUDYIrLAJSBWJJ8s7"},"value":{"@id":"MoW5dNuCkN09ArHzdIy2yGa5bL5oyO1zVhBUP6yS","annotationValue":"seizure channel mutant","comments":[],"termAccession":"","termSource":""}},{"@id":"","category":{"@id":"rrAHixexWAdqOKNaj15Ezk66kWZSMcprcBRZfg1k"},"value":{"@id":"XJ2x9G5FYOhyGGbYDO0xkevuzcPxPnzdf1nFa9fv","annotationValue":"Space Flight","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D013026","termSource":"MESH"}}],"name":"Seits1_FLT_4"},{"@id":"#sample/140227415251120","characteristics":[{"category":{"@id":"399SzhBQzExSjIr4pjc31bssabQKEbyJxfwbrlYi"},"value":{"@id":"zqKk5bdXuNyksKKxoyi9xqOA4ULpewhpat406I7I","annotationValue":"Drosophila melanogaster","comments":[],"termAccession":"http://purl.bioontology.org/ontology/NCBITAXON/7227","termSource":"NCBITAXON"}},{"category":{"@id":"ckWn7OLUT8oddpV7c5wlAhWzZKOWJ2rc9Atk6Kgv"},"value":{"@id":"3Q0UXLc3Ll28gi5Y9xsNtsjTh7VdiwL66jfmlgES","annotationValue":"Canton-S","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"category":{"@id":"KCzWlZo7KEPqFn8gM6YdlLjQ41WWXWTC5I7BYv8U"},"value":{"@id":"wYfmNXXKA89HVKoGYL5zHDatYawmSRUyCIyyPoNz","annotationValue":"Female","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D005260","termSource":"MESH"}},{"category":{"@id":"GkVM3ErqJoJzYEwMqQtm23ugJtXghhe2hrOB1p5I"},"unit":{"@id":"EN78WNpG5NZElsP9sj1OVW0TMS8NNuDr1mEzIqd2"},"value":"1 to 3"},{"category":{"@id":"49juZ4FGB57I9ooIymVnW2cIJgBOgOHjamafkg30"},"value":{"@id":"4JQIlRv4pgRkb0Kf7atvxhWUrPuqcjNxWuIzJVHu","annotationValue":"Heart","comments":[],"termAccession":"http://purl.org/sig/ont/fma/fma7088","termSource":"FMA"}}],"derivesFrom":[],"factorValues":[{"@id":"","category":{"@id":"V2XSGFfD6LJDb1O5A9sAxTihUDYIrLAJSBWJJ8s7"},"value":{"@id":"MoW5dNuCkN09ArHzdIy2yGa5bL5oyO1zVhBUP6yS","annotationValue":"seizure channel mutant","comments":[],"termAccession":"","termSource":""}},{"@id":"","category":{"@id":"rrAHixexWAdqOKNaj15Ezk66kWZSMcprcBRZfg1k"},"value":{"@id":"uSz5i4QBr7uZce9ezDEYPeTPfWANK23t9aUzRnAy","annotationValue":"Ground Control","comments":[],"termAccession":"","termSource":""}}],"name":"Seits1_GC_1"},{"@id":"#sample/140227415251888","characteristics":[{"category":{"@id":"399SzhBQzExSjIr4pjc31bssabQKEbyJxfwbrlYi"},"value":{"@id":"zqKk5bdXuNyksKKxoyi9xqOA4ULpewhpat406I7I","annotationValue":"Drosophila melanogaster","comments":[],"termAccession":"http://purl.bioontology.org/ontology/NCBITAXON/7227","termSource":"NCBITAXON"}},{"category":{"@id":"ckWn7OLUT8oddpV7c5wlAhWzZKOWJ2rc9Atk6Kgv"},"value":{"@id":"3Q0UXLc3Ll28gi5Y9xsNtsjTh7VdiwL66jfmlgES","annotationValue":"Canton-S","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"category":{"@id":"KCzWlZo7KEPqFn8gM6YdlLjQ41WWXWTC5I7BYv8U"},"value":{"@id":"wYfmNXXKA89HVKoGYL5zHDatYawmSRUyCIyyPoNz","annotationValue":"Female","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D005260","termSource":"MESH"}},{"category":{"@id":"GkVM3ErqJoJzYEwMqQtm23ugJtXghhe2hrOB1p5I"},"unit":{"@id":"EN78WNpG5NZElsP9sj1OVW0TMS8NNuDr1mEzIqd2"},"value":"1 to 3"},{"category":{"@id":"49juZ4FGB57I9ooIymVnW2cIJgBOgOHjamafkg30"},"value":{"@id":"4JQIlRv4pgRkb0Kf7atvxhWUrPuqcjNxWuIzJVHu","annotationValue":"Heart","comments":[],"termAccession":"http://purl.org/sig/ont/fma/fma7088","termSource":"FMA"}}],"derivesFrom":[],"factorValues":[{"@id":"","category":{"@id":"V2XSGFfD6LJDb1O5A9sAxTihUDYIrLAJSBWJJ8s7"},"value":{"@id":"MoW5dNuCkN09ArHzdIy2yGa5bL5oyO1zVhBUP6yS","annotationValue":"seizure channel mutant","comments":[],"termAccession":"","termSource":""}},{"@id":"","category":{"@id":"rrAHixexWAdqOKNaj15Ezk66kWZSMcprcBRZfg1k"},"value":{"@id":"uSz5i4QBr7uZce9ezDEYPeTPfWANK23t9aUzRnAy","annotationValue":"Ground Control","comments":[],"termAccession":"","termSource":""}}],"name":"Seits1_GC_2"},{"@id":"#sample/140227415249344","characteristics":[{"category":{"@id":"399SzhBQzExSjIr4pjc31bssabQKEbyJxfwbrlYi"},"value":{"@id":"zqKk5bdXuNyksKKxoyi9xqOA4ULpewhpat406I7I","annotationValue":"Drosophila melanogaster","comments":[],"termAccession":"http://purl.bioontology.org/ontology/NCBITAXON/7227","termSource":"NCBITAXON"}},{"category":{"@id":"ckWn7OLUT8oddpV7c5wlAhWzZKOWJ2rc9Atk6Kgv"},"value":{"@id":"3Q0UXLc3Ll28gi5Y9xsNtsjTh7VdiwL66jfmlgES","annotationValue":"Canton-S","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"category":{"@id":"KCzWlZo7KEPqFn8gM6YdlLjQ41WWXWTC5I7BYv8U"},"value":{"@id":"wYfmNXXKA89HVKoGYL5zHDatYawmSRUyCIyyPoNz","annotationValue":"Female","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D005260","termSource":"MESH"}},{"category":{"@id":"GkVM3ErqJoJzYEwMqQtm23ugJtXghhe2hrOB1p5I"},"unit":{"@id":"EN78WNpG5NZElsP9sj1OVW0TMS8NNuDr1mEzIqd2"},"value":"1 to 3"},{"category":{"@id":"49juZ4FGB57I9ooIymVnW2cIJgBOgOHjamafkg30"},"value":{"@id":"4JQIlRv4pgRkb0Kf7atvxhWUrPuqcjNxWuIzJVHu","annotationValue":"Heart","comments":[],"termAccession":"http://purl.org/sig/ont/fma/fma7088","termSource":"FMA"}}],"derivesFrom":[],"factorValues":[{"@id":"","category":{"@id":"V2XSGFfD6LJDb1O5A9sAxTihUDYIrLAJSBWJJ8s7"},"value":{"@id":"MoW5dNuCkN09ArHzdIy2yGa5bL5oyO1zVhBUP6yS","annotationValue":"seizure channel mutant","comments":[],"termAccession":"","termSource":""}},{"@id":"","category":{"@id":"rrAHixexWAdqOKNaj15Ezk66kWZSMcprcBRZfg1k"},"value":{"@id":"uSz5i4QBr7uZce9ezDEYPeTPfWANK23t9aUzRnAy","annotationValue":"Ground Control","comments":[],"termAccession":"","termSource":""}}],"name":"Seits1_GC_3"}],"sources":[]},"measurementType":{"@id":"jGo9iA3xprysX2IZmhNYRdsyHQEGg4GuLcAiq5h4","annotationValue":"transcription profiling","comments":[],"termAccession":"obo:OBI_0000424","termSource":"OBI"},"processSequence":[{"@id":"#process/140227399381200","comments":[],"date":"","executesProtocol":{"@id":"#140227424557232"},"inputs":[{"@id":"#sample/140227415252272"}],"nextProcess":{"@id":"#process/140227399382352"},"outputs":[],"parameterValues":[{"category":{"@id":"#140227394526512"},"value":"Agilent 2200 Tapestation system"},{"category":{"@id":"#140227394525744"},"unit":{"@id":"TMJwwCnkdlOdaWbRT7O53722QOw05KSv85lzqWY4"},"value":"8.3 to 9.6"}],"performer":""},{"@id":"#process/140227399420464","comments":[],"date":"","executesProtocol":{"@id":"#140227424557232"},"inputs":[{"@id":"#sample/140227415251312"}],"nextProcess":{"@id":"#process/140227422494000"},"outputs":[],"parameterValues":[{"category":{"@id":"#140227394526512"},"value":"Agilent 2200 Tapestation system"},{"category":{"@id":"#140227394525744"},"unit":{"@id":"TMJwwCnkdlOdaWbRT7O53722QOw05KSv85lzqWY4"},"value":"8.3 to 9.6"}],"performer":""},{"@id":"#process/140227409470128","comments":[],"date":"","executesProtocol":{"@id":"#140227424557232"},"inputs":[{"@id":"#sample/140227415251744"}],"nextProcess":{"@id":"#process/140227422492464"},"outputs":[],"parameterValues":[{"category":{"@id":"#140227394526512"},"value":"Agilent 2200 Tapestation system"},{"category":{"@id":"#140227394525744"},"unit":{"@id":"TMJwwCnkdlOdaWbRT7O53722QOw05KSv85lzqWY4"},"value":"8.3 to 9.6"}],"performer":""},{"@id":"#process/140227399421760","comments":[],"date":"","executesProtocol":{"@id":"#140227424557232"},"inputs":[{"@id":"#sample/140227415250448"}],"nextProcess":{"@id":"#process/140227422492896"},"outputs":[],"parameterValues":[{"category":{"@id":"#140227394526512"},"value":"Agilent 2200 Tapestation system"},{"category":{"@id":"#140227394525744"},"unit":{"@id":"TMJwwCnkdlOdaWbRT7O53722QOw05KSv85lzqWY4"},"value":"8.3 to 9.6"}],"performer":""},{"@id":"#process/140227416975056","comments":[],"date":"","executesProtocol":{"@id":"#140227424557232"},"inputs":[{"@id":"#sample/140227415251504"}],"nextProcess":{"@id":"#process/140227422492944"},"outputs":[],"parameterValues":[{"category":{"@id":"#140227394526512"},"value":"Agilent 2200 Tapestation system"},{"category":{"@id":"#140227394525744"},"unit":{"@id":"TMJwwCnkdlOdaWbRT7O53722QOw05KSv85lzqWY4"},"value":"8.3 to 9.6"}],"performer":""},{"@id":"#process/140227416974240","comments":[],"date":"","executesProtocol":{"@id":"#140227424557232"},"inputs":[{"@id":"#sample/140227415251600"}],"nextProcess":{"@id":"#process/140227422493328"},"outputs":[],"parameterValues":[{"category":{"@id":"#140227394526512"},"value":"Agilent 2200 Tapestation system"},{"category":{"@id":"#140227394525744"},"unit":{"@id":"TMJwwCnkdlOdaWbRT7O53722QOw05KSv85lzqWY4"},"value":"8.3 to 9.6"}],"performer":""},{"@id":"#process/140227416977216","comments":[],"date":"","executesProtocol":{"@id":"#140227424557232"},"inputs":[{"@id":"#sample/140227415251120"}],"nextProcess":{"@id":"#process/140227422493280"},"outputs":[],"parameterValues":[{"category":{"@id":"#140227394526512"},"value":"Agilent 2200 Tapestation system"},{"category":{"@id":"#140227394525744"},"unit":{"@id":"TMJwwCnkdlOdaWbRT7O53722QOw05KSv85lzqWY4"},"value":"8.3 to 9.6"}],"performer":""},{"@id":"#process/140227416976928","comments":[],"date":"","executesProtocol":{"@id":"#140227424557232"},"inputs":[{"@id":"#sample/140227415251888"}],"nextProcess":{"@id":"#process/140227413990992"},"outputs":[],"parameterValues":[{"category":{"@id":"#140227394526512"},"value":"Agilent 2200 Tapestation system"},{"category":{"@id":"#140227394525744"},"unit":{"@id":"TMJwwCnkdlOdaWbRT7O53722QOw05KSv85lzqWY4"},"value":"8.3 to 9.6"}],"performer":""},{"@id":"#process/140227416975392","comments":[],"date":"","executesProtocol":{"@id":"#140227424557232"},"inputs":[{"@id":"#sample/140227415249344"}],"nextProcess":{"@id":"#process/140227413987776"},"outputs":[],"parameterValues":[{"category":{"@id":"#140227394526512"},"value":"Agilent 2200 Tapestation system"},{"category":{"@id":"#140227394525744"},"unit":{"@id":"TMJwwCnkdlOdaWbRT7O53722QOw05KSv85lzqWY4"},"value":"8.3 to 9.6"}],"performer":""},{"@id":"#process/140227416974816","comments":[],"date":"","executesProtocol":{"@id":"#140227424557232"},"inputs":[{"@id":"#sample/140227415252032"}],"nextProcess":{"@id":"#process/140227413990608"},"outputs":[],"parameterValues":[{"category":{"@id":"#140227394526512"},"value":"Agilent 2200 Tapestation system"},{"category":{"@id":"#140227394525744"},"unit":{"@id":"TMJwwCnkdlOdaWbRT7O53722QOw05KSv85lzqWY4"},"value":"8.3 to 9.6"}],"performer":""},{"@id":"#process/140227422491216","comments":[],"date":"","executesProtocol":{"@id":"#140227424557232"},"inputs":[{"@id":"#sample/140227415252800"}],"nextProcess":{"@id":"#process/140227413988112"},"outputs":[],"parameterValues":[{"category":{"@id":"#140227394526512"},"value":"Agilent 2200 Tapestation system"},{"category":{"@id":"#140227394525744"},"unit":{"@id":"TMJwwCnkdlOdaWbRT7O53722QOw05KSv85lzqWY4"},"value":"8.3 to 9.6"}],"performer":""},{"@id":"#process/140227422492176","comments":[],"date":"","executesProtocol":{"@id":"#140227424557232"},"inputs":[{"@id":"#sample/140227415249632"}],"nextProcess":{"@id":"#process/140227413989936"},"outputs":[],"parameterValues":[{"category":{"@id":"#140227394526512"},"value":"Agilent 2200 Tapestation system"},{"category":{"@id":"#140227394525744"},"unit":{"@id":"TMJwwCnkdlOdaWbRT7O53722QOw05KSv85lzqWY4"},"value":"8.3 to 9.6"}],"performer":""},{"@id":"#process/140227422493376","comments":[],"date":"","executesProtocol":{"@id":"#140227424557232"},"inputs":[{"@id":"#sample/140227415252944"}],"nextProcess":{"@id":"#process/140227413990944"},"outputs":[],"parameterValues":[{"category":{"@id":"#140227394526512"},"value":"Agilent 2200 Tapestation system"},{"category":{"@id":"#140227394525744"},"unit":{"@id":"TMJwwCnkdlOdaWbRT7O53722QOw05KSv85lzqWY4"},"value":"8.3 to 9.6"}],"performer":""},{"@id":"#process/140227399382352","comments":[],"date":"","executesProtocol":{"@id":"#140227424558384"},"inputs":[{"@id":"#material/extract-140227409472144"}],"nextProcess":{"@id":"#process/140227413989024"},"outputs":[{"@id":"#data/rawdatafile-140227399419600"}],"parameterValues":[{"category":{"@id":"#140227394526464"},"value":"polyA enrichment"},{"category":{"@id":"#140227394523872"},"value":"PAIRED"},{"category":{"@id":"#140227394526800"},"value":"STRANDED"},{"category":{"@id":"#140227394525216"},"value":"Illumina TruSeq RNA sample preparation kit"}],"performer":"","previousProcess":{"@id":"#process/140227399381200"}},{"@id":"#process/140227422494000","comments":[],"date":"","executesProtocol":{"@id":"#140227424558384"},"inputs":[{"@id":"#material/extract-140227409472240"}],"nextProcess":{"@id":"#process/140227413989024"},"outputs":[{"@id":"#data/rawdatafile-140227399421904"}],"parameterValues":[{"category":{"@id":"#140227394526464"},"value":"polyA enrichment"},{"category":{"@id":"#140227394523872"},"value":"PAIRED"},{"category":{"@id":"#140227394526800"},"value":"STRANDED"},{"category":{"@id":"#140227394525216"},"value":"Illumina TruSeq RNA sample preparation kit"}],"performer":"","previousProcess":{"@id":"#process/140227399420464"}},{"@id":"#process/140227422492464","comments":[],"date":"","executesProtocol":{"@id":"#140227424558384"},"inputs":[{"@id":"#material/extract-140227409469696"}],"nextProcess":{"@id":"#process/140227413989024"},"outputs":[{"@id":"#data/rawdatafile-140227399420176"}],"parameterValues":[{"category":{"@id":"#140227394526464"},"value":"polyA enrichment"},{"category":{"@id":"#140227394523872"},"value":"PAIRED"},{"category":{"@id":"#140227394526800"},"value":"STRANDED"},{"category":{"@id":"#140227394525216"},"value":"Illumina TruSeq RNA sample preparation kit"}],"performer":"","previousProcess":{"@id":"#process/140227409470128"}},{"@id":"#process/140227422492896","comments":[],"date":"","executesProtocol":{"@id":"#140227424558384"},"inputs":[{"@id":"#material/extract-140227409472048"}],"nextProcess":{"@id":"#process/140227413989024"},"outputs":[{"@id":"#data/rawdatafile-140227399418304"}],"parameterValues":[{"category":{"@id":"#140227394526464"},"value":"polyA enrichment"},{"category":{"@id":"#140227394523872"},"value":"PAIRED"},{"category":{"@id":"#140227394526800"},"value":"STRANDED"},{"category":{"@id":"#140227394525216"},"value":"Illumina TruSeq RNA sample preparation kit"}],"performer":"","previousProcess":{"@id":"#process/140227399421760"}},{"@id":"#process/140227422492944","comments":[],"date":"","executesProtocol":{"@id":"#140227424558384"},"inputs":[{"@id":"#material/extract-140227409473104"}],"nextProcess":{"@id":"#process/140227413989024"},"outputs":[{"@id":"#data/rawdatafile-140227399419888"}],"parameterValues":[{"category":{"@id":"#140227394526464"},"value":"polyA enrichment"},{"category":{"@id":"#140227394523872"},"value":"PAIRED"},{"category":{"@id":"#140227394526800"},"value":"STRANDED"},{"category":{"@id":"#140227394525216"},"value":"Illumina TruSeq RNA sample preparation kit"}],"performer":"","previousProcess":{"@id":"#process/140227416975056"}},{"@id":"#process/140227422493328","comments":[],"date":"","executesProtocol":{"@id":"#140227424558384"},"inputs":[{"@id":"#material/extract-140227409471808"}],"nextProcess":{"@id":"#process/140227413989024"},"outputs":[{"@id":"#data/rawdatafile-140227399421472"}],"parameterValues":[{"category":{"@id":"#140227394526464"},"value":"polyA enrichment"},{"category":{"@id":"#140227394523872"},"value":"PAIRED"},{"category":{"@id":"#140227394526800"},"value":"STRANDED"},{"category":{"@id":"#140227394525216"},"value":"Illumina TruSeq RNA sample preparation kit"}],"performer":"","previousProcess":{"@id":"#process/140227416974240"}},{"@id":"#process/140227422493280","comments":[],"date":"","executesProtocol":{"@id":"#140227424558384"},"inputs":[{"@id":"#material/extract-140227399420224"}],"nextProcess":{"@id":"#process/140227413989024"},"outputs":[{"@id":"#data/rawdatafile-140227399418592"}],"parameterValues":[{"category":{"@id":"#140227394526464"},"value":"polyA enrichment"},{"category":{"@id":"#140227394523872"},"value":"PAIRED"},{"category":{"@id":"#140227394526800"},"value":"STRANDED"},{"category":{"@id":"#140227394525216"},"value":"Illumina TruSeq RNA sample preparation kit"}],"performer":"","previousProcess":{"@id":"#process/140227416977216"}},{"@id":"#process/140227413990992","comments":[],"date":"","executesProtocol":{"@id":"#140227424558384"},"inputs":[{"@id":"#material/extract-140227399419120"}],"nextProcess":{"@id":"#process/140227413989024"},"outputs":[{"@id":"#data/rawdatafile-140227399418496"}],"parameterValues":[{"category":{"@id":"#140227394526464"},"value":"polyA enrichment"},{"category":{"@id":"#140227394523872"},"value":"PAIRED"},{"category":{"@id":"#140227394526800"},"value":"STRANDED"},{"category":{"@id":"#140227394525216"},"value":"Illumina TruSeq RNA sample preparation kit"}],"performer":"","previousProcess":{"@id":"#process/140227416976928"}},{"@id":"#process/140227413987776","comments":[],"date":"","executesProtocol":{"@id":"#140227424558384"},"inputs":[{"@id":"#material/extract-140227399420368"}],"nextProcess":{"@id":"#process/140227413989024"},"outputs":[{"@id":"#data/rawdatafile-140227399421520"}],"parameterValues":[{"category":{"@id":"#140227394526464"},"value":"polyA enrichment"},{"category":{"@id":"#140227394523872"},"value":"PAIRED"},{"category":{"@id":"#140227394526800"},"value":"STRANDED"},{"category":{"@id":"#140227394525216"},"value":"Illumina TruSeq RNA sample preparation kit"}],"performer":"","previousProcess":{"@id":"#process/140227416975392"}},{"@id":"#process/140227413990608","comments":[],"date":"","executesProtocol":{"@id":"#140227424558384"},"inputs":[{"@id":"#material/extract-140227399419360"}],"nextProcess":{"@id":"#process/140227413989024"},"outputs":[{"@id":"#data/rawdatafile-140227399418784"}],"parameterValues":[{"category":{"@id":"#140227394526464"},"value":"polyA enrichment"},{"category":{"@id":"#140227394523872"},"value":"PAIRED"},{"category":{"@id":"#140227394526800"},"value":"STRANDED"},{"category":{"@id":"#140227394525216"},"value":"Illumina TruSeq RNA sample preparation kit"}],"performer":"","previousProcess":{"@id":"#process/140227416974816"}},{"@id":"#process/140227413988112","comments":[],"date":"","executesProtocol":{"@id":"#140227424558384"},"inputs":[{"@id":"#material/extract-140227399419984"}],"nextProcess":{"@id":"#process/140227413989024"},"outputs":[{"@id":"#data/rawdatafile-140227399420656"}],"parameterValues":[{"category":{"@id":"#140227394526464"},"value":"polyA enrichment"},{"category":{"@id":"#140227394523872"},"value":"PAIRED"},{"category":{"@id":"#140227394526800"},"value":"STRANDED"},{"category":{"@id":"#140227394525216"},"value":"Illumina TruSeq RNA sample preparation kit"}],"performer":"","previousProcess":{"@id":"#process/140227422491216"}},{"@id":"#process/140227413989936","comments":[],"date":"","executesProtocol":{"@id":"#140227424558384"},"inputs":[{"@id":"#material/extract-140227399421136"}],"nextProcess":{"@id":"#process/140227413989024"},"outputs":[{"@id":"#data/rawdatafile-140227399419744"}],"parameterValues":[{"category":{"@id":"#140227394526464"},"value":"polyA enrichment"},{"category":{"@id":"#140227394523872"},"value":"PAIRED"},{"category":{"@id":"#140227394526800"},"value":"STRANDED"},{"category":{"@id":"#140227394525216"},"value":"Illumina TruSeq RNA sample preparation kit"}],"performer":"","previousProcess":{"@id":"#process/140227422492176"}},{"@id":"#process/140227413990944","comments":[],"date":"","executesProtocol":{"@id":"#140227424558384"},"inputs":[{"@id":"#material/extract-140227399419648"}],"nextProcess":{"@id":"#process/140227413989024"},"outputs":[{"@id":"#data/rawdatafile-140227399418112"}],"parameterValues":[{"category":{"@id":"#140227394526464"},"value":"polyA enrichment"},{"category":{"@id":"#140227394523872"},"value":"PAIRED"},{"category":{"@id":"#140227394526800"},"value":"STRANDED"},{"category":{"@id":"#140227394525216"},"value":"Illumina TruSeq RNA sample preparation kit"}],"performer":"","previousProcess":{"@id":"#process/140227422493376"}},{"@id":"#process/140227413989024","comments":[],"date":"","executesProtocol":{"@id":"#140227424557472"},"inputs":[],"nextProcess":{"@id":"#process/140227417502432"},"outputs":[],"parameterValues":[{"category":{"@id":"#140227424845152"},"value":{"@id":"lRNvAj2cW7klnZpe1HFpUaax4GOFaPVq2BasbBAa","annotationValue":"Illumina HiSeq 2000","comments":[],"termAccession":"","termSource":""}},{"category":{"@id":"#140227424844912"},"unit":{"@id":"J9zuQ8cJ5nAZ0dkGAGlKxwYb0KE2akReGGczonYr"},"value":"100"}],"performer":"","previousProcess":{"@id":"#process/140227413990944"}},{"@id":"#process/140227413990752","comments":[],"date":"","executesProtocol":{"@id":"#140227394524496"},"inputs":[{"@id":"#data/rawdatafile-140227399419600"}],"nextProcess":{"@id":"#process/140227417503920"},"outputs":[],"parameterValues":[{"category":{"@id":"#140227424091920"},"unit":{"@id":"SpK5aXzkRdx4JxPjAD0yIGuCVDJKAJqQgiW4QFcv"},"value":"14583541"},{"category":{"@id":"#140227424089616"},"unit":{"@id":"RTx4J1JidPmyZq4okib7BI1bwmT20FbjpIUotsdg"},"value":"8.59"},{"category":{"@id":"#140227424088944"},"value":"GLDS-347_rna_seq_CS_GC_1_GLbulkRNAseq_R1_raw.fastq.gz,GLDS-347_rna_seq_CS_GC_1_GLbulkRNAseq_R2_raw.fastq.gz"},{"category":{"@id":"#140227424088800"},"value":"GLDS-347_rna_seq_raw_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_raw_multiqc_GLbulkRNAseq.html"}],"performer":"","previousProcess":{"@id":"#process/140227413989024"}},{"@id":"#process/140227401345920","comments":[],"date":"","executesProtocol":{"@id":"#140227394524496"},"inputs":[{"@id":"#data/rawdatafile-140227399421904"}],"nextProcess":{"@id":"#process/140227399421376"},"outputs":[],"parameterValues":[{"category":{"@id":"#140227424091920"},"unit":{"@id":"SpK5aXzkRdx4JxPjAD0yIGuCVDJKAJqQgiW4QFcv"},"value":"10166035"},{"category":{"@id":"#140227424089616"},"unit":{"@id":"RTx4J1JidPmyZq4okib7BI1bwmT20FbjpIUotsdg"},"value":"12.3"},{"category":{"@id":"#140227424088944"},"value":"GLDS-347_rna_seq_CS_GC_2_GLbulkRNAseq_R1_raw.fastq.gz,GLDS-347_rna_seq_CS_GC_2_GLbulkRNAseq_R2_raw.fastq.gz"},{"category":{"@id":"#140227424088800"},"value":"GLDS-347_rna_seq_raw_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_raw_multiqc_GLbulkRNAseq.html"}],"performer":"","previousProcess":{"@id":"#process/140227413989024"}},{"@id":"#process/140227422493040","comments":[],"date":"","executesProtocol":{"@id":"#140227394524496"},"inputs":[{"@id":"#data/rawdatafile-140227399420176"}],"nextProcess":{"@id":"#process/140227399774704"},"outputs":[],"parameterValues":[{"category":{"@id":"#140227424091920"},"unit":{"@id":"SpK5aXzkRdx4JxPjAD0yIGuCVDJKAJqQgiW4QFcv"},"value":"12642506"},{"category":{"@id":"#140227424089616"},"unit":{"@id":"RTx4J1JidPmyZq4okib7BI1bwmT20FbjpIUotsdg"},"value":"13.82"},{"category":{"@id":"#140227424088944"},"value":"GLDS-347_rna_seq_CS_GC_3_GLbulkRNAseq_R1_raw.fastq.gz,GLDS-347_rna_seq_CS_GC_3_GLbulkRNAseq_R2_raw.fastq.gz"},{"category":{"@id":"#140227424088800"},"value":"GLDS-347_rna_seq_raw_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_raw_multiqc_GLbulkRNAseq.html"}],"performer":"","previousProcess":{"@id":"#process/140227413989024"}},{"@id":"#process/140227401345344","comments":[],"date":"","executesProtocol":{"@id":"#140227394524496"},"inputs":[{"@id":"#data/rawdatafile-140227399418304"}],"nextProcess":{"@id":"#process/140227399777872"},"outputs":[],"parameterValues":[{"category":{"@id":"#140227424091920"},"unit":{"@id":"SpK5aXzkRdx4JxPjAD0yIGuCVDJKAJqQgiW4QFcv"},"value":"19931990"},{"category":{"@id":"#140227424089616"},"unit":{"@id":"RTx4J1JidPmyZq4okib7BI1bwmT20FbjpIUotsdg"},"value":"12.74"},{"category":{"@id":"#140227424088944"},"value":"GLDS-347_rna_seq_CS_FLT_1_GLbulkRNAseq_R1_raw.fastq.gz,GLDS-347_rna_seq_CS_FLT_1_GLbulkRNAseq_R2_raw.fastq.gz"},{"category":{"@id":"#140227424088800"},"value":"GLDS-347_rna_seq_raw_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_raw_multiqc_GLbulkRNAseq.html"}],"performer":"","previousProcess":{"@id":"#process/140227413989024"}},{"@id":"#process/140227401344336","comments":[],"date":"","executesProtocol":{"@id":"#140227394524496"},"inputs":[{"@id":"#data/rawdatafile-140227399419888"}],"nextProcess":{"@id":"#process/140227399776480"},"outputs":[],"parameterValues":[{"category":{"@id":"#140227424091920"},"unit":{"@id":"SpK5aXzkRdx4JxPjAD0yIGuCVDJKAJqQgiW4QFcv"},"value":"18034642"},{"category":{"@id":"#140227424089616"},"unit":{"@id":"RTx4J1JidPmyZq4okib7BI1bwmT20FbjpIUotsdg"},"value":"10.71"},{"category":{"@id":"#140227424088944"},"value":"GLDS-347_rna_seq_CS_FLT_2_GLbulkRNAseq_R1_raw.fastq.gz,GLDS-347_rna_seq_CS_FLT_2_GLbulkRNAseq_R2_raw.fastq.gz"},{"category":{"@id":"#140227424088800"},"value":"GLDS-347_rna_seq_raw_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_raw_multiqc_GLbulkRNAseq.html"}],"performer":"","previousProcess":{"@id":"#process/140227413989024"}},{"@id":"#process/140227401343328","comments":[],"date":"","executesProtocol":{"@id":"#140227394524496"},"inputs":[{"@id":"#data/rawdatafile-140227399421472"}],"nextProcess":{"@id":"#process/140227399774416"},"outputs":[],"parameterValues":[{"category":{"@id":"#140227424091920"},"unit":{"@id":"SpK5aXzkRdx4JxPjAD0yIGuCVDJKAJqQgiW4QFcv"},"value":"14113912"},{"category":{"@id":"#140227424089616"},"unit":{"@id":"RTx4J1JidPmyZq4okib7BI1bwmT20FbjpIUotsdg"},"value":"8.53"},{"category":{"@id":"#140227424088944"},"value":"GLDS-347_rna_seq_CS_FLT_3_GLbulkRNAseq_R1_raw.fastq.gz,GLDS-347_rna_seq_CS_FLT_3_GLbulkRNAseq_R2_raw.fastq.gz"},{"category":{"@id":"#140227424088800"},"value":"GLDS-347_rna_seq_raw_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_raw_multiqc_GLbulkRNAseq.html"}],"performer":"","previousProcess":{"@id":"#process/140227413989024"}},{"@id":"#process/140227401344816","comments":[],"date":"","executesProtocol":{"@id":"#140227394524496"},"inputs":[{"@id":"#data/rawdatafile-140227399418592"}],"nextProcess":{"@id":"#process/140227423833680"},"outputs":[],"parameterValues":[{"category":{"@id":"#140227424091920"},"unit":{"@id":"SpK5aXzkRdx4JxPjAD0yIGuCVDJKAJqQgiW4QFcv"},"value":"16528087"},{"category":{"@id":"#140227424089616"},"unit":{"@id":"RTx4J1JidPmyZq4okib7BI1bwmT20FbjpIUotsdg"},"value":"3.58"},{"category":{"@id":"#140227424088944"},"value":"GLDS-347_rna_seq_Seits1_GC_1_GLbulkRNAseq_R1_raw.fastq.gz,GLDS-347_rna_seq_Seits1_GC_1_GLbulkRNAseq_R2_raw.fastq.gz"},{"category":{"@id":"#140227424088800"},"value":"GLDS-347_rna_seq_raw_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_raw_multiqc_GLbulkRNAseq.html"}],"performer":"","previousProcess":{"@id":"#process/140227413989024"}},{"@id":"#process/140227401345776","comments":[],"date":"","executesProtocol":{"@id":"#140227394524496"},"inputs":[{"@id":"#data/rawdatafile-140227399418496"}],"nextProcess":{"@id":"#process/140227423832048"},"outputs":[],"parameterValues":[{"category":{"@id":"#140227424091920"},"unit":{"@id":"SpK5aXzkRdx4JxPjAD0yIGuCVDJKAJqQgiW4QFcv"},"value":"18729203"},{"category":{"@id":"#140227424089616"},"unit":{"@id":"RTx4J1JidPmyZq4okib7BI1bwmT20FbjpIUotsdg"},"value":"2.14"},{"category":{"@id":"#140227424088944"},"value":"GLDS-347_rna_seq_Seits1_GC_2_GLbulkRNAseq_R1_raw.fastq.gz,GLDS-347_rna_seq_Seits1_GC_2_GLbulkRNAseq_R2_raw.fastq.gz"},{"category":{"@id":"#140227424088800"},"value":"GLDS-347_rna_seq_raw_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_raw_multiqc_GLbulkRNAseq.html"}],"performer":"","previousProcess":{"@id":"#process/140227413989024"}},{"@id":"#process/140227417502336","comments":[],"date":"","executesProtocol":{"@id":"#140227394524496"},"inputs":[{"@id":"#data/rawdatafile-140227399421520"}],"nextProcess":{"@id":"#process/140227423833104"},"outputs":[],"parameterValues":[{"category":{"@id":"#140227424091920"},"unit":{"@id":"SpK5aXzkRdx4JxPjAD0yIGuCVDJKAJqQgiW4QFcv"},"value":"17887334"},{"category":{"@id":"#140227424089616"},"unit":{"@id":"RTx4J1JidPmyZq4okib7BI1bwmT20FbjpIUotsdg"},"value":"12.14"},{"category":{"@id":"#140227424088944"},"value":"GLDS-347_rna_seq_Seits1_GC_3_GLbulkRNAseq_R1_raw.fastq.gz,GLDS-347_rna_seq_Seits1_GC_3_GLbulkRNAseq_R2_raw.fastq.gz"},{"category":{"@id":"#140227424088800"},"value":"GLDS-347_rna_seq_raw_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_raw_multiqc_GLbulkRNAseq.html"}],"performer":"","previousProcess":{"@id":"#process/140227413989024"}},{"@id":"#process/140227417502864","comments":[],"date":"","executesProtocol":{"@id":"#140227394524496"},"inputs":[{"@id":"#data/rawdatafile-140227399418784"}],"nextProcess":{"@id":"#process/140227420704432"},"outputs":[],"parameterValues":[{"category":{"@id":"#140227424091920"},"unit":{"@id":"SpK5aXzkRdx4JxPjAD0yIGuCVDJKAJqQgiW4QFcv"},"value":"18316735"},{"category":{"@id":"#140227424089616"},"unit":{"@id":"RTx4J1JidPmyZq4okib7BI1bwmT20FbjpIUotsdg"},"value":"9.34"},{"category":{"@id":"#140227424088944"},"value":"GLDS-347_rna_seq_Seits1_FLT_1_GLbulkRNAseq_R1_raw.fastq.gz,GLDS-347_rna_seq_Seits1_FLT_1_GLbulkRNAseq_R2_raw.fastq.gz"},{"category":{"@id":"#140227424088800"},"value":"GLDS-347_rna_seq_raw_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_raw_multiqc_GLbulkRNAseq.html"}],"performer":"","previousProcess":{"@id":"#process/140227413989024"}},{"@id":"#process/140227417505552","comments":[],"date":"","executesProtocol":{"@id":"#140227394524496"},"inputs":[{"@id":"#data/rawdatafile-140227399420656"}],"nextProcess":{"@id":"#process/140227420703232"},"outputs":[],"parameterValues":[{"category":{"@id":"#140227424091920"},"unit":{"@id":"SpK5aXzkRdx4JxPjAD0yIGuCVDJKAJqQgiW4QFcv"},"value":"19189015"},{"category":{"@id":"#140227424089616"},"unit":{"@id":"RTx4J1JidPmyZq4okib7BI1bwmT20FbjpIUotsdg"},"value":"6.16"},{"category":{"@id":"#140227424088944"},"value":"GLDS-347_rna_seq_Seits1_FLT_2_GLbulkRNAseq_R1_raw.fastq.gz,GLDS-347_rna_seq_Seits1_FLT_2_GLbulkRNAseq_R2_raw.fastq.gz"},{"category":{"@id":"#140227424088800"},"value":"GLDS-347_rna_seq_raw_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_raw_multiqc_GLbulkRNAseq.html"}],"performer":"","previousProcess":{"@id":"#process/140227413989024"}},{"@id":"#process/140227417505648","comments":[],"date":"","executesProtocol":{"@id":"#140227394524496"},"inputs":[{"@id":"#data/rawdatafile-140227399419744"}],"nextProcess":{"@id":"#process/140227420702752"},"outputs":[],"parameterValues":[{"category":{"@id":"#140227424091920"},"unit":{"@id":"SpK5aXzkRdx4JxPjAD0yIGuCVDJKAJqQgiW4QFcv"},"value":"18489486"},{"category":{"@id":"#140227424089616"},"unit":{"@id":"RTx4J1JidPmyZq4okib7BI1bwmT20FbjpIUotsdg"},"value":"6.51"},{"category":{"@id":"#140227424088944"},"value":"GLDS-347_rna_seq_Seits1_FLT_3_GLbulkRNAseq_R1_raw.fastq.gz,GLDS-347_rna_seq_Seits1_FLT_3_GLbulkRNAseq_R2_raw.fastq.gz"},{"category":{"@id":"#140227424088800"},"value":"GLDS-347_rna_seq_raw_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_raw_multiqc_GLbulkRNAseq.html"}],"performer":"","previousProcess":{"@id":"#process/140227413989024"}},{"@id":"#process/140227417502432","comments":[],"date":"","executesProtocol":{"@id":"#140227394524496"},"inputs":[{"@id":"#data/rawdatafile-140227399418112"}],"nextProcess":{"@id":"#process/140227423843760"},"outputs":[],"parameterValues":[{"category":{"@id":"#140227424091920"},"unit":{"@id":"SpK5aXzkRdx4JxPjAD0yIGuCVDJKAJqQgiW4QFcv"},"value":"20426224"},{"category":{"@id":"#140227424089616"},"unit":{"@id":"RTx4J1JidPmyZq4okib7BI1bwmT20FbjpIUotsdg"},"value":"1.98"},{"category":{"@id":"#140227424088944"},"value":"GLDS-347_rna_seq_Seits1_FLT_4_GLbulkRNAseq_R1_raw.fastq.gz,GLDS-347_rna_seq_Seits1_FLT_4_GLbulkRNAseq_R2_raw.fastq.gz"},{"category":{"@id":"#140227424088800"},"value":"GLDS-347_rna_seq_raw_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_raw_multiqc_GLbulkRNAseq.html"}],"performer":"","previousProcess":{"@id":"#process/140227413989024"}},{"@id":"#process/140227417503920","comments":[],"date":"","executesProtocol":{"@id":"#140227394527088"},"inputs":[],"outputs":[],"parameterValues":[{"category":{"@id":"#140227422272672"},"value":"GLDS-347_rna_seq_CS_GC_1_GLbulkRNAseq_R1_trimmed.fastq.gz,GLDS-347_rna_seq_CS_GC_1_GLbulkRNAseq_R2_trimmed.fastq.gz"},{"category":{"@id":"#140227422272624"},"value":"GLDS-347_rna_seq_CS_GC_1_R1_GLbulkRNAseq_trimming_report.txt,GLDS-347_rna_seq_CS_GC_1_R2_GLbulkRNAseq_trimming_report.txt"},{"category":{"@id":"#140227422271760"},"value":"GLDS-347_rna_seq_trimmed_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_trimmed_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422273200"},"value":"GLDS-347_rna_seq_CS_GC_1_GLbulkRNAseq_Aligned.sortedByCoord_sorted.out.bam,GLDS-347_rna_seq_CS_GC_1_GLbulkRNAseq_Aligned.sortedByCoord_sorted.out.bam.bai,GLDS-347_rna_seq_CS_GC_1_GLbulkRNAseq_Aligned.toTranscriptome.out.bam,GLDS-347_rna_seq_CS_GC_1_GLbulkRNAseq_SJ.out.tab"},{"category":{"@id":"#140227422269744"},"value":"GLDS-347_rna_seq_CS_GC_1_GLbulkRNAseq_R1_unmapped.fastq.gz,GLDS-347_rna_seq_CS_GC_1_GLbulkRNAseq_R2_unmapped.fastq.gz"},{"category":{"@id":"#140227422271088"},"value":"GLDS-347_rna_seq_CS_GC_1_GLbulkRNAseq_Log.final.out"},{"category":{"@id":"#140227422270512"},"value":"GLDS-347_rna_seq_align_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_align_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272480"},"value":"GLDS-347_rna_seq_geneBody_cov_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_geneBody_cov_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_infer_exp_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_infer_exp_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_inner_dist_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_inner_dist_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_read_dist_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_read_dist_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272048"},"value":"GLDS-347_rna_seq_CS_GC_1_GLbulkRNAseq.genes.results,GLDS-347_rna_seq_CS_GC_1_GLbulkRNAseq.isoforms.results,GLDS-347_rna_seq_CS_GC_1_GLbulkRNAseq_rRNArm.genes.results"},{"category":{"@id":"#140227422270992"},"value":"GLDS-347_rna_seq_RSEM_Unnormalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_STAR_Unnormalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_RSEM_Unnormalized_Counts_rRNArm_GLbulkRNAseq.csv"},{"category":{"@id":"#140227422270464"},"value":"GLDS-347_rna_seq_RSEM_count_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_RSEM_count_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272192"},"value":"GLDS-347_rna_seq_Normalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_VST_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_Normalized_Counts_rRNArm_GLbulkRNAseq.csv,GLDS-347_rna_seq_VST_Counts_rRNArm_GLbulkRNAseq.csv"},{"category":{"@id":"#140227422270944"},"value":"GLDS-347_rna_seq_SampleTable_GLbulkRNAseq.csv,GLDS-347_rna_seq_contrasts_GLbulkRNAseq.csv,GLDS-347_rna_seq_differential_expression_GLbulkRNAseq.csv,GLDS-347_rna_seq_differential_expression_rRNArm_GLbulkRNAseq.csv"}],"performer":"","previousProcess":{"@id":"#process/140227413990752"}},{"@id":"#process/140227399421376","comments":[],"date":"","executesProtocol":{"@id":"#140227394527088"},"inputs":[],"outputs":[],"parameterValues":[{"category":{"@id":"#140227422272672"},"value":"GLDS-347_rna_seq_CS_GC_2_GLbulkRNAseq_R1_trimmed.fastq.gz,GLDS-347_rna_seq_CS_GC_2_GLbulkRNAseq_R2_trimmed.fastq.gz"},{"category":{"@id":"#140227422272624"},"value":"GLDS-347_rna_seq_CS_GC_2_R1_GLbulkRNAseq_trimming_report.txt,GLDS-347_rna_seq_CS_GC_2_R2_GLbulkRNAseq_trimming_report.txt"},{"category":{"@id":"#140227422271760"},"value":"GLDS-347_rna_seq_trimmed_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_trimmed_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422273200"},"value":"GLDS-347_rna_seq_CS_GC_2_GLbulkRNAseq_Aligned.sortedByCoord_sorted.out.bam,GLDS-347_rna_seq_CS_GC_2_GLbulkRNAseq_Aligned.sortedByCoord_sorted.out.bam.bai,GLDS-347_rna_seq_CS_GC_2_GLbulkRNAseq_Aligned.toTranscriptome.out.bam,GLDS-347_rna_seq_CS_GC_2_GLbulkRNAseq_SJ.out.tab"},{"category":{"@id":"#140227422269744"},"value":"GLDS-347_rna_seq_CS_GC_2_GLbulkRNAseq_R1_unmapped.fastq.gz,GLDS-347_rna_seq_CS_GC_2_GLbulkRNAseq_R2_unmapped.fastq.gz"},{"category":{"@id":"#140227422271088"},"value":"GLDS-347_rna_seq_CS_GC_2_GLbulkRNAseq_Log.final.out"},{"category":{"@id":"#140227422270512"},"value":"GLDS-347_rna_seq_align_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_align_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272480"},"value":"GLDS-347_rna_seq_geneBody_cov_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_geneBody_cov_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_infer_exp_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_infer_exp_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_inner_dist_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_inner_dist_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_read_dist_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_read_dist_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272048"},"value":"GLDS-347_rna_seq_CS_GC_2_GLbulkRNAseq.genes.results,GLDS-347_rna_seq_CS_GC_2_GLbulkRNAseq.isoforms.results,GLDS-347_rna_seq_CS_GC_2_GLbulkRNAseq_rRNArm.genes.results"},{"category":{"@id":"#140227422270992"},"value":"GLDS-347_rna_seq_RSEM_Unnormalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_STAR_Unnormalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_RSEM_Unnormalized_Counts_rRNArm_GLbulkRNAseq.csv"},{"category":{"@id":"#140227422270464"},"value":"GLDS-347_rna_seq_RSEM_count_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_RSEM_count_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272192"},"value":"GLDS-347_rna_seq_Normalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_VST_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_Normalized_Counts_rRNArm_GLbulkRNAseq.csv,GLDS-347_rna_seq_VST_Counts_rRNArm_GLbulkRNAseq.csv"},{"category":{"@id":"#140227422270944"},"value":"GLDS-347_rna_seq_SampleTable_GLbulkRNAseq.csv,GLDS-347_rna_seq_contrasts_GLbulkRNAseq.csv,GLDS-347_rna_seq_differential_expression_GLbulkRNAseq.csv,GLDS-347_rna_seq_differential_expression_rRNArm_GLbulkRNAseq.csv"}],"performer":"","previousProcess":{"@id":"#process/140227401345920"}},{"@id":"#process/140227399774704","comments":[],"date":"","executesProtocol":{"@id":"#140227394527088"},"inputs":[],"outputs":[],"parameterValues":[{"category":{"@id":"#140227422272672"},"value":"GLDS-347_rna_seq_CS_GC_3_GLbulkRNAseq_R1_trimmed.fastq.gz,GLDS-347_rna_seq_CS_GC_3_GLbulkRNAseq_R2_trimmed.fastq.gz"},{"category":{"@id":"#140227422272624"},"value":"GLDS-347_rna_seq_CS_GC_3_R1_GLbulkRNAseq_trimming_report.txt,GLDS-347_rna_seq_CS_GC_3_R2_GLbulkRNAseq_trimming_report.txt"},{"category":{"@id":"#140227422271760"},"value":"GLDS-347_rna_seq_trimmed_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_trimmed_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422273200"},"value":"GLDS-347_rna_seq_CS_GC_3_GLbulkRNAseq_Aligned.sortedByCoord_sorted.out.bam,GLDS-347_rna_seq_CS_GC_3_GLbulkRNAseq_Aligned.sortedByCoord_sorted.out.bam.bai,GLDS-347_rna_seq_CS_GC_3_GLbulkRNAseq_Aligned.toTranscriptome.out.bam,GLDS-347_rna_seq_CS_GC_3_GLbulkRNAseq_SJ.out.tab"},{"category":{"@id":"#140227422269744"},"value":"GLDS-347_rna_seq_CS_GC_3_GLbulkRNAseq_R1_unmapped.fastq.gz,GLDS-347_rna_seq_CS_GC_3_GLbulkRNAseq_R2_unmapped.fastq.gz"},{"category":{"@id":"#140227422271088"},"value":"GLDS-347_rna_seq_CS_GC_3_GLbulkRNAseq_Log.final.out"},{"category":{"@id":"#140227422270512"},"value":"GLDS-347_rna_seq_align_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_align_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272480"},"value":"GLDS-347_rna_seq_geneBody_cov_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_geneBody_cov_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_infer_exp_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_infer_exp_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_inner_dist_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_inner_dist_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_read_dist_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_read_dist_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272048"},"value":"GLDS-347_rna_seq_CS_GC_3_GLbulkRNAseq.genes.results,GLDS-347_rna_seq_CS_GC_3_GLbulkRNAseq.isoforms.results,GLDS-347_rna_seq_CS_GC_3_GLbulkRNAseq_rRNArm.genes.results"},{"category":{"@id":"#140227422270992"},"value":"GLDS-347_rna_seq_RSEM_Unnormalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_STAR_Unnormalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_RSEM_Unnormalized_Counts_rRNArm_GLbulkRNAseq.csv"},{"category":{"@id":"#140227422270464"},"value":"GLDS-347_rna_seq_RSEM_count_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_RSEM_count_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272192"},"value":"GLDS-347_rna_seq_Normalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_VST_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_Normalized_Counts_rRNArm_GLbulkRNAseq.csv,GLDS-347_rna_seq_VST_Counts_rRNArm_GLbulkRNAseq.csv"},{"category":{"@id":"#140227422270944"},"value":"GLDS-347_rna_seq_SampleTable_GLbulkRNAseq.csv,GLDS-347_rna_seq_contrasts_GLbulkRNAseq.csv,GLDS-347_rna_seq_differential_expression_GLbulkRNAseq.csv,GLDS-347_rna_seq_differential_expression_rRNArm_GLbulkRNAseq.csv"}],"performer":"","previousProcess":{"@id":"#process/140227422493040"}},{"@id":"#process/140227399777872","comments":[],"date":"","executesProtocol":{"@id":"#140227394527088"},"inputs":[],"outputs":[],"parameterValues":[{"category":{"@id":"#140227422272672"},"value":"GLDS-347_rna_seq_CS_FLT_1_GLbulkRNAseq_R1_trimmed.fastq.gz,GLDS-347_rna_seq_CS_FLT_1_GLbulkRNAseq_R2_trimmed.fastq.gz"},{"category":{"@id":"#140227422272624"},"value":"GLDS-347_rna_seq_CS_FLT_1_R1_GLbulkRNAseq_trimming_report.txt,GLDS-347_rna_seq_CS_FLT_1_R2_GLbulkRNAseq_trimming_report.txt"},{"category":{"@id":"#140227422271760"},"value":"GLDS-347_rna_seq_trimmed_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_trimmed_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422273200"},"value":"GLDS-347_rna_seq_CS_FLT_1_GLbulkRNAseq_Aligned.sortedByCoord_sorted.out.bam,GLDS-347_rna_seq_CS_FLT_1_GLbulkRNAseq_Aligned.sortedByCoord_sorted.out.bam.bai,GLDS-347_rna_seq_CS_FLT_1_GLbulkRNAseq_Aligned.toTranscriptome.out.bam,GLDS-347_rna_seq_CS_FLT_1_GLbulkRNAseq_SJ.out.tab"},{"category":{"@id":"#140227422269744"},"value":"GLDS-347_rna_seq_CS_FLT_1_GLbulkRNAseq_R1_unmapped.fastq.gz,GLDS-347_rna_seq_CS_FLT_1_GLbulkRNAseq_R2_unmapped.fastq.gz"},{"category":{"@id":"#140227422271088"},"value":"GLDS-347_rna_seq_CS_FLT_1_GLbulkRNAseq_Log.final.out"},{"category":{"@id":"#140227422270512"},"value":"GLDS-347_rna_seq_align_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_align_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272480"},"value":"GLDS-347_rna_seq_geneBody_cov_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_geneBody_cov_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_infer_exp_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_infer_exp_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_inner_dist_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_inner_dist_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_read_dist_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_read_dist_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272048"},"value":"GLDS-347_rna_seq_CS_FLT_1_GLbulkRNAseq.genes.results,GLDS-347_rna_seq_CS_FLT_1_GLbulkRNAseq.isoforms.results,GLDS-347_rna_seq_CS_FLT_1_GLbulkRNAseq_rRNArm.genes.results"},{"category":{"@id":"#140227422270992"},"value":"GLDS-347_rna_seq_RSEM_Unnormalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_STAR_Unnormalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_RSEM_Unnormalized_Counts_rRNArm_GLbulkRNAseq.csv"},{"category":{"@id":"#140227422270464"},"value":"GLDS-347_rna_seq_RSEM_count_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_RSEM_count_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272192"},"value":"GLDS-347_rna_seq_Normalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_VST_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_Normalized_Counts_rRNArm_GLbulkRNAseq.csv,GLDS-347_rna_seq_VST_Counts_rRNArm_GLbulkRNAseq.csv"},{"category":{"@id":"#140227422270944"},"value":"GLDS-347_rna_seq_SampleTable_GLbulkRNAseq.csv,GLDS-347_rna_seq_contrasts_GLbulkRNAseq.csv,GLDS-347_rna_seq_differential_expression_GLbulkRNAseq.csv,GLDS-347_rna_seq_differential_expression_rRNArm_GLbulkRNAseq.csv"}],"performer":"","previousProcess":{"@id":"#process/140227401345344"}},{"@id":"#process/140227399776480","comments":[],"date":"","executesProtocol":{"@id":"#140227394527088"},"inputs":[],"outputs":[],"parameterValues":[{"category":{"@id":"#140227422272672"},"value":"GLDS-347_rna_seq_CS_FLT_2_GLbulkRNAseq_R1_trimmed.fastq.gz,GLDS-347_rna_seq_CS_FLT_2_GLbulkRNAseq_R2_trimmed.fastq.gz"},{"category":{"@id":"#140227422272624"},"value":"GLDS-347_rna_seq_CS_FLT_2_R1_GLbulkRNAseq_trimming_report.txt,GLDS-347_rna_seq_CS_FLT_2_R2_GLbulkRNAseq_trimming_report.txt"},{"category":{"@id":"#140227422271760"},"value":"GLDS-347_rna_seq_trimmed_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_trimmed_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422273200"},"value":"GLDS-347_rna_seq_CS_FLT_2_GLbulkRNAseq_Aligned.sortedByCoord_sorted.out.bam,GLDS-347_rna_seq_CS_FLT_2_GLbulkRNAseq_Aligned.sortedByCoord_sorted.out.bam.bai,GLDS-347_rna_seq_CS_FLT_2_GLbulkRNAseq_Aligned.toTranscriptome.out.bam,GLDS-347_rna_seq_CS_FLT_2_GLbulkRNAseq_SJ.out.tab"},{"category":{"@id":"#140227422269744"},"value":"GLDS-347_rna_seq_CS_FLT_2_GLbulkRNAseq_R1_unmapped.fastq.gz,GLDS-347_rna_seq_CS_FLT_2_GLbulkRNAseq_R2_unmapped.fastq.gz"},{"category":{"@id":"#140227422271088"},"value":"GLDS-347_rna_seq_CS_FLT_2_GLbulkRNAseq_Log.final.out"},{"category":{"@id":"#140227422270512"},"value":"GLDS-347_rna_seq_align_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_align_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272480"},"value":"GLDS-347_rna_seq_geneBody_cov_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_geneBody_cov_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_infer_exp_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_infer_exp_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_inner_dist_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_inner_dist_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_read_dist_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_read_dist_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272048"},"value":"GLDS-347_rna_seq_CS_FLT_2_GLbulkRNAseq.genes.results,GLDS-347_rna_seq_CS_FLT_2_GLbulkRNAseq.isoforms.results,GLDS-347_rna_seq_CS_FLT_2_GLbulkRNAseq_rRNArm.genes.results"},{"category":{"@id":"#140227422270992"},"value":"GLDS-347_rna_seq_RSEM_Unnormalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_STAR_Unnormalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_RSEM_Unnormalized_Counts_rRNArm_GLbulkRNAseq.csv"},{"category":{"@id":"#140227422270464"},"value":"GLDS-347_rna_seq_RSEM_count_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_RSEM_count_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272192"},"value":"GLDS-347_rna_seq_Normalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_VST_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_Normalized_Counts_rRNArm_GLbulkRNAseq.csv,GLDS-347_rna_seq_VST_Counts_rRNArm_GLbulkRNAseq.csv"},{"category":{"@id":"#140227422270944"},"value":"GLDS-347_rna_seq_SampleTable_GLbulkRNAseq.csv,GLDS-347_rna_seq_contrasts_GLbulkRNAseq.csv,GLDS-347_rna_seq_differential_expression_GLbulkRNAseq.csv,GLDS-347_rna_seq_differential_expression_rRNArm_GLbulkRNAseq.csv"}],"performer":"","previousProcess":{"@id":"#process/140227401344336"}},{"@id":"#process/140227399774416","comments":[],"date":"","executesProtocol":{"@id":"#140227394527088"},"inputs":[],"outputs":[],"parameterValues":[{"category":{"@id":"#140227422272672"},"value":"GLDS-347_rna_seq_CS_FLT_3_GLbulkRNAseq_R1_trimmed.fastq.gz,GLDS-347_rna_seq_CS_FLT_3_GLbulkRNAseq_R2_trimmed.fastq.gz"},{"category":{"@id":"#140227422272624"},"value":"GLDS-347_rna_seq_CS_FLT_3_R1_GLbulkRNAseq_trimming_report.txt,GLDS-347_rna_seq_CS_FLT_3_R2_GLbulkRNAseq_trimming_report.txt"},{"category":{"@id":"#140227422271760"},"value":"GLDS-347_rna_seq_trimmed_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_trimmed_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422273200"},"value":"GLDS-347_rna_seq_CS_FLT_3_GLbulkRNAseq_Aligned.sortedByCoord_sorted.out.bam,GLDS-347_rna_seq_CS_FLT_3_GLbulkRNAseq_Aligned.sortedByCoord_sorted.out.bam.bai,GLDS-347_rna_seq_CS_FLT_3_GLbulkRNAseq_Aligned.toTranscriptome.out.bam,GLDS-347_rna_seq_CS_FLT_3_GLbulkRNAseq_SJ.out.tab"},{"category":{"@id":"#140227422269744"},"value":"GLDS-347_rna_seq_CS_FLT_3_GLbulkRNAseq_R1_unmapped.fastq.gz,GLDS-347_rna_seq_CS_FLT_3_GLbulkRNAseq_R2_unmapped.fastq.gz"},{"category":{"@id":"#140227422271088"},"value":"GLDS-347_rna_seq_CS_FLT_3_GLbulkRNAseq_Log.final.out"},{"category":{"@id":"#140227422270512"},"value":"GLDS-347_rna_seq_align_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_align_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272480"},"value":"GLDS-347_rna_seq_geneBody_cov_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_geneBody_cov_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_infer_exp_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_infer_exp_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_inner_dist_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_inner_dist_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_read_dist_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_read_dist_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272048"},"value":"GLDS-347_rna_seq_CS_FLT_3_GLbulkRNAseq.genes.results,GLDS-347_rna_seq_CS_FLT_3_GLbulkRNAseq.isoforms.results,GLDS-347_rna_seq_CS_FLT_3_GLbulkRNAseq_rRNArm.genes.results"},{"category":{"@id":"#140227422270992"},"value":"GLDS-347_rna_seq_RSEM_Unnormalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_STAR_Unnormalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_RSEM_Unnormalized_Counts_rRNArm_GLbulkRNAseq.csv"},{"category":{"@id":"#140227422270464"},"value":"GLDS-347_rna_seq_RSEM_count_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_RSEM_count_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272192"},"value":"GLDS-347_rna_seq_Normalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_VST_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_Normalized_Counts_rRNArm_GLbulkRNAseq.csv,GLDS-347_rna_seq_VST_Counts_rRNArm_GLbulkRNAseq.csv"},{"category":{"@id":"#140227422270944"},"value":"GLDS-347_rna_seq_SampleTable_GLbulkRNAseq.csv,GLDS-347_rna_seq_contrasts_GLbulkRNAseq.csv,GLDS-347_rna_seq_differential_expression_GLbulkRNAseq.csv,GLDS-347_rna_seq_differential_expression_rRNArm_GLbulkRNAseq.csv"}],"performer":"","previousProcess":{"@id":"#process/140227401343328"}},{"@id":"#process/140227423833680","comments":[],"date":"","executesProtocol":{"@id":"#140227394527088"},"inputs":[],"outputs":[],"parameterValues":[{"category":{"@id":"#140227422272672"},"value":"GLDS-347_rna_seq_Seits1_GC_1_GLbulkRNAseq_R1_trimmed.fastq.gz,GLDS-347_rna_seq_Seits1_GC_1_GLbulkRNAseq_R2_trimmed.fastq.gz"},{"category":{"@id":"#140227422272624"},"value":"GLDS-347_rna_seq_Seits1_GC_1_R1_GLbulkRNAseq_trimming_report.txt,GLDS-347_rna_seq_Seits1_GC_1_R2_GLbulkRNAseq_trimming_report.txt"},{"category":{"@id":"#140227422271760"},"value":"GLDS-347_rna_seq_trimmed_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_trimmed_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422273200"},"value":"GLDS-347_rna_seq_Seits1_GC_1_GLbulkRNAseq_Aligned.sortedByCoord_sorted.out.bam,GLDS-347_rna_seq_Seits1_GC_1_GLbulkRNAseq_Aligned.sortedByCoord_sorted.out.bam.bai,GLDS-347_rna_seq_Seits1_GC_1_GLbulkRNAseq_Aligned.toTranscriptome.out.bam,GLDS-347_rna_seq_Seits1_GC_1_GLbulkRNAseq_SJ.out.tab"},{"category":{"@id":"#140227422269744"},"value":"GLDS-347_rna_seq_Seits1_GC_1_GLbulkRNAseq_R1_unmapped.fastq.gz,GLDS-347_rna_seq_Seits1_GC_1_GLbulkRNAseq_R2_unmapped.fastq.gz"},{"category":{"@id":"#140227422271088"},"value":"GLDS-347_rna_seq_Seits1_GC_1_GLbulkRNAseq_Log.final.out"},{"category":{"@id":"#140227422270512"},"value":"GLDS-347_rna_seq_align_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_align_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272480"},"value":"GLDS-347_rna_seq_geneBody_cov_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_geneBody_cov_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_infer_exp_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_infer_exp_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_inner_dist_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_inner_dist_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_read_dist_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_read_dist_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272048"},"value":"GLDS-347_rna_seq_Seits1_GC_1_GLbulkRNAseq.genes.results,GLDS-347_rna_seq_Seits1_GC_1_GLbulkRNAseq.isoforms.results,GLDS-347_rna_seq_Seits1_GC_1_GLbulkRNAseq_rRNArm.genes.results"},{"category":{"@id":"#140227422270992"},"value":"GLDS-347_rna_seq_RSEM_Unnormalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_STAR_Unnormalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_RSEM_Unnormalized_Counts_rRNArm_GLbulkRNAseq.csv"},{"category":{"@id":"#140227422270464"},"value":"GLDS-347_rna_seq_RSEM_count_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_RSEM_count_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272192"},"value":"GLDS-347_rna_seq_Normalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_VST_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_Normalized_Counts_rRNArm_GLbulkRNAseq.csv,GLDS-347_rna_seq_VST_Counts_rRNArm_GLbulkRNAseq.csv"},{"category":{"@id":"#140227422270944"},"value":"GLDS-347_rna_seq_SampleTable_GLbulkRNAseq.csv,GLDS-347_rna_seq_contrasts_GLbulkRNAseq.csv,GLDS-347_rna_seq_differential_expression_GLbulkRNAseq.csv,GLDS-347_rna_seq_differential_expression_rRNArm_GLbulkRNAseq.csv"}],"performer":"","previousProcess":{"@id":"#process/140227401344816"}},{"@id":"#process/140227423832048","comments":[],"date":"","executesProtocol":{"@id":"#140227394527088"},"inputs":[],"outputs":[],"parameterValues":[{"category":{"@id":"#140227422272672"},"value":"GLDS-347_rna_seq_Seits1_GC_2_GLbulkRNAseq_R1_trimmed.fastq.gz,GLDS-347_rna_seq_Seits1_GC_2_GLbulkRNAseq_R2_trimmed.fastq.gz"},{"category":{"@id":"#140227422272624"},"value":"GLDS-347_rna_seq_Seits1_GC_2_R1_GLbulkRNAseq_trimming_report.txt,GLDS-347_rna_seq_Seits1_GC_2_R2_GLbulkRNAseq_trimming_report.txt"},{"category":{"@id":"#140227422271760"},"value":"GLDS-347_rna_seq_trimmed_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_trimmed_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422273200"},"value":"GLDS-347_rna_seq_Seits1_GC_2_GLbulkRNAseq_Aligned.sortedByCoord_sorted.out.bam,GLDS-347_rna_seq_Seits1_GC_2_GLbulkRNAseq_Aligned.sortedByCoord_sorted.out.bam.bai,GLDS-347_rna_seq_Seits1_GC_2_GLbulkRNAseq_Aligned.toTranscriptome.out.bam,GLDS-347_rna_seq_Seits1_GC_2_GLbulkRNAseq_SJ.out.tab"},{"category":{"@id":"#140227422269744"},"value":"GLDS-347_rna_seq_Seits1_GC_2_GLbulkRNAseq_R1_unmapped.fastq.gz,GLDS-347_rna_seq_Seits1_GC_2_GLbulkRNAseq_R2_unmapped.fastq.gz"},{"category":{"@id":"#140227422271088"},"value":"GLDS-347_rna_seq_Seits1_GC_2_GLbulkRNAseq_Log.final.out"},{"category":{"@id":"#140227422270512"},"value":"GLDS-347_rna_seq_align_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_align_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272480"},"value":"GLDS-347_rna_seq_geneBody_cov_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_geneBody_cov_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_infer_exp_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_infer_exp_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_inner_dist_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_inner_dist_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_read_dist_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_read_dist_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272048"},"value":"GLDS-347_rna_seq_Seits1_GC_2_GLbulkRNAseq.genes.results,GLDS-347_rna_seq_Seits1_GC_2_GLbulkRNAseq.isoforms.results,GLDS-347_rna_seq_Seits1_GC_2_GLbulkRNAseq_rRNArm.genes.results"},{"category":{"@id":"#140227422270992"},"value":"GLDS-347_rna_seq_RSEM_Unnormalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_STAR_Unnormalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_RSEM_Unnormalized_Counts_rRNArm_GLbulkRNAseq.csv"},{"category":{"@id":"#140227422270464"},"value":"GLDS-347_rna_seq_RSEM_count_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_RSEM_count_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272192"},"value":"GLDS-347_rna_seq_Normalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_VST_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_Normalized_Counts_rRNArm_GLbulkRNAseq.csv,GLDS-347_rna_seq_VST_Counts_rRNArm_GLbulkRNAseq.csv"},{"category":{"@id":"#140227422270944"},"value":"GLDS-347_rna_seq_SampleTable_GLbulkRNAseq.csv,GLDS-347_rna_seq_contrasts_GLbulkRNAseq.csv,GLDS-347_rna_seq_differential_expression_GLbulkRNAseq.csv,GLDS-347_rna_seq_differential_expression_rRNArm_GLbulkRNAseq.csv"}],"performer":"","previousProcess":{"@id":"#process/140227401345776"}},{"@id":"#process/140227423833104","comments":[],"date":"","executesProtocol":{"@id":"#140227394527088"},"inputs":[],"outputs":[],"parameterValues":[{"category":{"@id":"#140227422272672"},"value":"GLDS-347_rna_seq_Seits1_GC_3_GLbulkRNAseq_R1_trimmed.fastq.gz,GLDS-347_rna_seq_Seits1_GC_3_GLbulkRNAseq_R2_trimmed.fastq.gz"},{"category":{"@id":"#140227422272624"},"value":"GLDS-347_rna_seq_Seits1_GC_3_R1_GLbulkRNAseq_trimming_report.txt,GLDS-347_rna_seq_Seits1_GC_3_R2_GLbulkRNAseq_trimming_report.txt"},{"category":{"@id":"#140227422271760"},"value":"GLDS-347_rna_seq_trimmed_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_trimmed_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422273200"},"value":"GLDS-347_rna_seq_Seits1_GC_3_GLbulkRNAseq_Aligned.sortedByCoord_sorted.out.bam,GLDS-347_rna_seq_Seits1_GC_3_GLbulkRNAseq_Aligned.sortedByCoord_sorted.out.bam.bai,GLDS-347_rna_seq_Seits1_GC_3_GLbulkRNAseq_Aligned.toTranscriptome.out.bam,GLDS-347_rna_seq_Seits1_GC_3_GLbulkRNAseq_SJ.out.tab"},{"category":{"@id":"#140227422269744"},"value":"GLDS-347_rna_seq_Seits1_GC_3_GLbulkRNAseq_R1_unmapped.fastq.gz,GLDS-347_rna_seq_Seits1_GC_3_GLbulkRNAseq_R2_unmapped.fastq.gz"},{"category":{"@id":"#140227422271088"},"value":"GLDS-347_rna_seq_Seits1_GC_3_GLbulkRNAseq_Log.final.out"},{"category":{"@id":"#140227422270512"},"value":"GLDS-347_rna_seq_align_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_align_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272480"},"value":"GLDS-347_rna_seq_geneBody_cov_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_geneBody_cov_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_infer_exp_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_infer_exp_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_inner_dist_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_inner_dist_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_read_dist_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_read_dist_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272048"},"value":"GLDS-347_rna_seq_Seits1_GC_3_GLbulkRNAseq.genes.results,GLDS-347_rna_seq_Seits1_GC_3_GLbulkRNAseq.isoforms.results,GLDS-347_rna_seq_Seits1_GC_3_GLbulkRNAseq_rRNArm.genes.results"},{"category":{"@id":"#140227422270992"},"value":"GLDS-347_rna_seq_RSEM_Unnormalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_STAR_Unnormalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_RSEM_Unnormalized_Counts_rRNArm_GLbulkRNAseq.csv"},{"category":{"@id":"#140227422270464"},"value":"GLDS-347_rna_seq_RSEM_count_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_RSEM_count_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272192"},"value":"GLDS-347_rna_seq_Normalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_VST_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_Normalized_Counts_rRNArm_GLbulkRNAseq.csv,GLDS-347_rna_seq_VST_Counts_rRNArm_GLbulkRNAseq.csv"},{"category":{"@id":"#140227422270944"},"value":"GLDS-347_rna_seq_SampleTable_GLbulkRNAseq.csv,GLDS-347_rna_seq_contrasts_GLbulkRNAseq.csv,GLDS-347_rna_seq_differential_expression_GLbulkRNAseq.csv,GLDS-347_rna_seq_differential_expression_rRNArm_GLbulkRNAseq.csv"}],"performer":"","previousProcess":{"@id":"#process/140227417502336"}},{"@id":"#process/140227420704432","comments":[],"date":"","executesProtocol":{"@id":"#140227394527088"},"inputs":[],"outputs":[],"parameterValues":[{"category":{"@id":"#140227422272672"},"value":"GLDS-347_rna_seq_Seits1_FLT_1_GLbulkRNAseq_R1_trimmed.fastq.gz,GLDS-347_rna_seq_Seits1_FLT_1_GLbulkRNAseq_R2_trimmed.fastq.gz"},{"category":{"@id":"#140227422272624"},"value":"GLDS-347_rna_seq_Seits1_FLT_1_R1_GLbulkRNAseq_trimming_report.txt,GLDS-347_rna_seq_Seits1_FLT_1_R2_GLbulkRNAseq_trimming_report.txt"},{"category":{"@id":"#140227422271760"},"value":"GLDS-347_rna_seq_trimmed_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_trimmed_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422273200"},"value":"GLDS-347_rna_seq_Seits1_FLT_1_GLbulkRNAseq_Aligned.sortedByCoord_sorted.out.bam,GLDS-347_rna_seq_Seits1_FLT_1_GLbulkRNAseq_Aligned.sortedByCoord_sorted.out.bam.bai,GLDS-347_rna_seq_Seits1_FLT_1_GLbulkRNAseq_Aligned.toTranscriptome.out.bam,GLDS-347_rna_seq_Seits1_FLT_1_GLbulkRNAseq_SJ.out.tab"},{"category":{"@id":"#140227422269744"},"value":"GLDS-347_rna_seq_Seits1_FLT_1_GLbulkRNAseq_R1_unmapped.fastq.gz,GLDS-347_rna_seq_Seits1_FLT_1_GLbulkRNAseq_R2_unmapped.fastq.gz"},{"category":{"@id":"#140227422271088"},"value":"GLDS-347_rna_seq_Seits1_FLT_1_GLbulkRNAseq_Log.final.out"},{"category":{"@id":"#140227422270512"},"value":"GLDS-347_rna_seq_align_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_align_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272480"},"value":"GLDS-347_rna_seq_geneBody_cov_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_geneBody_cov_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_infer_exp_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_infer_exp_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_inner_dist_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_inner_dist_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_read_dist_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_read_dist_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272048"},"value":"GLDS-347_rna_seq_Seits1_FLT_1_GLbulkRNAseq.genes.results,GLDS-347_rna_seq_Seits1_FLT_1_GLbulkRNAseq.isoforms.results,GLDS-347_rna_seq_Seits1_FLT_1_GLbulkRNAseq_rRNArm.genes.results"},{"category":{"@id":"#140227422270992"},"value":"GLDS-347_rna_seq_RSEM_Unnormalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_STAR_Unnormalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_RSEM_Unnormalized_Counts_rRNArm_GLbulkRNAseq.csv"},{"category":{"@id":"#140227422270464"},"value":"GLDS-347_rna_seq_RSEM_count_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_RSEM_count_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272192"},"value":"GLDS-347_rna_seq_Normalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_VST_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_Normalized_Counts_rRNArm_GLbulkRNAseq.csv,GLDS-347_rna_seq_VST_Counts_rRNArm_GLbulkRNAseq.csv"},{"category":{"@id":"#140227422270944"},"value":"GLDS-347_rna_seq_SampleTable_GLbulkRNAseq.csv,GLDS-347_rna_seq_contrasts_GLbulkRNAseq.csv,GLDS-347_rna_seq_differential_expression_GLbulkRNAseq.csv,GLDS-347_rna_seq_differential_expression_rRNArm_GLbulkRNAseq.csv"}],"performer":"","previousProcess":{"@id":"#process/140227417502864"}},{"@id":"#process/140227420703232","comments":[],"date":"","executesProtocol":{"@id":"#140227394527088"},"inputs":[],"outputs":[],"parameterValues":[{"category":{"@id":"#140227422272672"},"value":"GLDS-347_rna_seq_Seits1_FLT_2_GLbulkRNAseq_R1_trimmed.fastq.gz,GLDS-347_rna_seq_Seits1_FLT_2_GLbulkRNAseq_R2_trimmed.fastq.gz"},{"category":{"@id":"#140227422272624"},"value":"GLDS-347_rna_seq_Seits1_FLT_2_R1_GLbulkRNAseq_trimming_report.txt,GLDS-347_rna_seq_Seits1_FLT_2_R2_GLbulkRNAseq_trimming_report.txt"},{"category":{"@id":"#140227422271760"},"value":"GLDS-347_rna_seq_trimmed_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_trimmed_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422273200"},"value":"GLDS-347_rna_seq_Seits1_FLT_2_GLbulkRNAseq_Aligned.sortedByCoord_sorted.out.bam,GLDS-347_rna_seq_Seits1_FLT_2_GLbulkRNAseq_Aligned.sortedByCoord_sorted.out.bam.bai,GLDS-347_rna_seq_Seits1_FLT_2_GLbulkRNAseq_Aligned.toTranscriptome.out.bam,GLDS-347_rna_seq_Seits1_FLT_2_GLbulkRNAseq_SJ.out.tab"},{"category":{"@id":"#140227422269744"},"value":"GLDS-347_rna_seq_Seits1_FLT_2_GLbulkRNAseq_R1_unmapped.fastq.gz,GLDS-347_rna_seq_Seits1_FLT_2_GLbulkRNAseq_R2_unmapped.fastq.gz"},{"category":{"@id":"#140227422271088"},"value":"GLDS-347_rna_seq_Seits1_FLT_2_GLbulkRNAseq_Log.final.out"},{"category":{"@id":"#140227422270512"},"value":"GLDS-347_rna_seq_align_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_align_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272480"},"value":"GLDS-347_rna_seq_geneBody_cov_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_geneBody_cov_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_infer_exp_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_infer_exp_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_inner_dist_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_inner_dist_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_read_dist_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_read_dist_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272048"},"value":"GLDS-347_rna_seq_Seits1_FLT_2_GLbulkRNAseq.genes.results,GLDS-347_rna_seq_Seits1_FLT_2_GLbulkRNAseq.isoforms.results,GLDS-347_rna_seq_Seits1_FLT_2_GLbulkRNAseq_rRNArm.genes.results"},{"category":{"@id":"#140227422270992"},"value":"GLDS-347_rna_seq_RSEM_Unnormalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_STAR_Unnormalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_RSEM_Unnormalized_Counts_rRNArm_GLbulkRNAseq.csv"},{"category":{"@id":"#140227422270464"},"value":"GLDS-347_rna_seq_RSEM_count_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_RSEM_count_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272192"},"value":"GLDS-347_rna_seq_Normalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_VST_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_Normalized_Counts_rRNArm_GLbulkRNAseq.csv,GLDS-347_rna_seq_VST_Counts_rRNArm_GLbulkRNAseq.csv"},{"category":{"@id":"#140227422270944"},"value":"GLDS-347_rna_seq_SampleTable_GLbulkRNAseq.csv,GLDS-347_rna_seq_contrasts_GLbulkRNAseq.csv,GLDS-347_rna_seq_differential_expression_GLbulkRNAseq.csv,GLDS-347_rna_seq_differential_expression_rRNArm_GLbulkRNAseq.csv"}],"performer":"","previousProcess":{"@id":"#process/140227417505552"}},{"@id":"#process/140227420702752","comments":[],"date":"","executesProtocol":{"@id":"#140227394527088"},"inputs":[],"outputs":[],"parameterValues":[{"category":{"@id":"#140227422272672"},"value":"GLDS-347_rna_seq_Seits1_FLT_3_GLbulkRNAseq_R1_trimmed.fastq.gz,GLDS-347_rna_seq_Seits1_FLT_3_GLbulkRNAseq_R2_trimmed.fastq.gz"},{"category":{"@id":"#140227422272624"},"value":"GLDS-347_rna_seq_Seits1_FLT_3_R1_GLbulkRNAseq_trimming_report.txt,GLDS-347_rna_seq_Seits1_FLT_3_R2_GLbulkRNAseq_trimming_report.txt"},{"category":{"@id":"#140227422271760"},"value":"GLDS-347_rna_seq_trimmed_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_trimmed_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422273200"},"value":"GLDS-347_rna_seq_Seits1_FLT_3_GLbulkRNAseq_Aligned.sortedByCoord_sorted.out.bam,GLDS-347_rna_seq_Seits1_FLT_3_GLbulkRNAseq_Aligned.sortedByCoord_sorted.out.bam.bai,GLDS-347_rna_seq_Seits1_FLT_3_GLbulkRNAseq_Aligned.toTranscriptome.out.bam,GLDS-347_rna_seq_Seits1_FLT_3_GLbulkRNAseq_SJ.out.tab"},{"category":{"@id":"#140227422269744"},"value":"GLDS-347_rna_seq_Seits1_FLT_3_GLbulkRNAseq_R1_unmapped.fastq.gz,GLDS-347_rna_seq_Seits1_FLT_3_GLbulkRNAseq_R2_unmapped.fastq.gz"},{"category":{"@id":"#140227422271088"},"value":"GLDS-347_rna_seq_Seits1_FLT_3_GLbulkRNAseq_Log.final.out"},{"category":{"@id":"#140227422270512"},"value":"GLDS-347_rna_seq_align_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_align_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272480"},"value":"GLDS-347_rna_seq_geneBody_cov_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_geneBody_cov_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_infer_exp_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_infer_exp_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_inner_dist_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_inner_dist_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_read_dist_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_read_dist_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272048"},"value":"GLDS-347_rna_seq_Seits1_FLT_3_GLbulkRNAseq.genes.results,GLDS-347_rna_seq_Seits1_FLT_3_GLbulkRNAseq.isoforms.results,GLDS-347_rna_seq_Seits1_FLT_3_GLbulkRNAseq_rRNArm.genes.results"},{"category":{"@id":"#140227422270992"},"value":"GLDS-347_rna_seq_RSEM_Unnormalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_STAR_Unnormalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_RSEM_Unnormalized_Counts_rRNArm_GLbulkRNAseq.csv"},{"category":{"@id":"#140227422270464"},"value":"GLDS-347_rna_seq_RSEM_count_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_RSEM_count_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272192"},"value":"GLDS-347_rna_seq_Normalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_VST_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_Normalized_Counts_rRNArm_GLbulkRNAseq.csv,GLDS-347_rna_seq_VST_Counts_rRNArm_GLbulkRNAseq.csv"},{"category":{"@id":"#140227422270944"},"value":"GLDS-347_rna_seq_SampleTable_GLbulkRNAseq.csv,GLDS-347_rna_seq_contrasts_GLbulkRNAseq.csv,GLDS-347_rna_seq_differential_expression_GLbulkRNAseq.csv,GLDS-347_rna_seq_differential_expression_rRNArm_GLbulkRNAseq.csv"}],"performer":"","previousProcess":{"@id":"#process/140227417505648"}},{"@id":"#process/140227423843760","comments":[],"date":"","executesProtocol":{"@id":"#140227394527088"},"inputs":[],"outputs":[],"parameterValues":[{"category":{"@id":"#140227422272672"},"value":"GLDS-347_rna_seq_Seits1_FLT_4_GLbulkRNAseq_R1_trimmed.fastq.gz,GLDS-347_rna_seq_Seits1_FLT_4_GLbulkRNAseq_R2_trimmed.fastq.gz"},{"category":{"@id":"#140227422272624"},"value":"GLDS-347_rna_seq_Seits1_FLT_4_R1_GLbulkRNAseq_trimming_report.txt,GLDS-347_rna_seq_Seits1_FLT_4_R2_GLbulkRNAseq_trimming_report.txt"},{"category":{"@id":"#140227422271760"},"value":"GLDS-347_rna_seq_trimmed_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_trimmed_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422273200"},"value":"GLDS-347_rna_seq_Seits1_FLT_4_GLbulkRNAseq_Aligned.sortedByCoord_sorted.out.bam,GLDS-347_rna_seq_Seits1_FLT_4_GLbulkRNAseq_Aligned.sortedByCoord_sorted.out.bam.bai,GLDS-347_rna_seq_Seits1_FLT_4_GLbulkRNAseq_Aligned.toTranscriptome.out.bam,GLDS-347_rna_seq_Seits1_FLT_4_GLbulkRNAseq_SJ.out.tab"},{"category":{"@id":"#140227422269744"},"value":"GLDS-347_rna_seq_Seits1_FLT_4_GLbulkRNAseq_R1_unmapped.fastq.gz,GLDS-347_rna_seq_Seits1_FLT_4_GLbulkRNAseq_R2_unmapped.fastq.gz"},{"category":{"@id":"#140227422271088"},"value":"GLDS-347_rna_seq_Seits1_FLT_4_GLbulkRNAseq_Log.final.out"},{"category":{"@id":"#140227422270512"},"value":"GLDS-347_rna_seq_align_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_align_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272480"},"value":"GLDS-347_rna_seq_geneBody_cov_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_geneBody_cov_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_infer_exp_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_infer_exp_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_inner_dist_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_inner_dist_multiqc_GLbulkRNAseq.html,GLDS-347_rna_seq_read_dist_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_read_dist_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272048"},"value":"GLDS-347_rna_seq_Seits1_FLT_4_GLbulkRNAseq.genes.results,GLDS-347_rna_seq_Seits1_FLT_4_GLbulkRNAseq.isoforms.results,GLDS-347_rna_seq_Seits1_FLT_4_GLbulkRNAseq_rRNArm.genes.results"},{"category":{"@id":"#140227422270992"},"value":"GLDS-347_rna_seq_RSEM_Unnormalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_STAR_Unnormalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_RSEM_Unnormalized_Counts_rRNArm_GLbulkRNAseq.csv"},{"category":{"@id":"#140227422270464"},"value":"GLDS-347_rna_seq_RSEM_count_multiqc_GLbulkRNAseq_data.zip,GLDS-347_rna_seq_RSEM_count_multiqc_GLbulkRNAseq.html"},{"category":{"@id":"#140227422272192"},"value":"GLDS-347_rna_seq_Normalized_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_VST_Counts_GLbulkRNAseq.csv,GLDS-347_rna_seq_Normalized_Counts_rRNArm_GLbulkRNAseq.csv,GLDS-347_rna_seq_VST_Counts_rRNArm_GLbulkRNAseq.csv"},{"category":{"@id":"#140227422270944"},"value":"GLDS-347_rna_seq_SampleTable_GLbulkRNAseq.csv,GLDS-347_rna_seq_contrasts_GLbulkRNAseq.csv,GLDS-347_rna_seq_differential_expression_GLbulkRNAseq.csv,GLDS-347_rna_seq_differential_expression_rRNArm_GLbulkRNAseq.csv"}],"performer":"","previousProcess":{"@id":"#process/140227417502432"}}],"technologyPlatform":"Illumina","technologyType":{"@id":"FGPgUG40RqNJgQ76DppeJCp32q6pDjuTqpVn4qL3","annotationValue":"RNA Sequencing (RNA-Seq)","comments":[],"termAccession":"obo:OBI_0001271","termSource":"OBI"},"unitCategories":[{"@id":"TMJwwCnkdlOdaWbRT7O53722QOw05KSv85lzqWY4","annotationValue":"RNA Integrity Number","comments":[],"termAccession":"http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C63637","termSource":"NCIT"},{"@id":"J9zuQ8cJ5nAZ0dkGAGlKxwYb0KE2akReGGczonYr","annotationValue":"base pair","comments":[],"termAccession":"http://purl.obolibrary.org/obo/UO_0000244","termSource":"UO"},{"@id":"RTx4J1JidPmyZq4okib7BI1bwmT20FbjpIUotsdg","annotationValue":"percent","comments":[],"termAccession":"http://purl.obolibrary.org/obo/UO_0000187","termSource":"UO"},{"@id":"SpK5aXzkRdx4JxPjAD0yIGuCVDJKAJqQgiW4QFcv","annotationValue":"read","comments":[],"termAccession":"http://purl.obolibrary.org/obo/SO_0000150","termSource":"SO"}]}],"characteristicCategories":[{"@id":"49juZ4FGB57I9ooIymVnW2cIJgBOgOHjamafkg30","characteristicType":{"@id":"LHmZyms6bEdkUL5QaHV42kuzI1ImB8hJYAjcA0Wu","annotationValue":"Material Type","comments":[],"termAccession":"","termSource":""}},{"@id":"399SzhBQzExSjIr4pjc31bssabQKEbyJxfwbrlYi","characteristicType":{"@id":"mlZb2gHEWcShWNCdbe4vOMc8yyux2QmLr9Ip5N4s","annotationValue":"Organism","comments":[],"termAccession":"","termSource":""}},{"@id":"KCzWlZo7KEPqFn8gM6YdlLjQ41WWXWTC5I7BYv8U","characteristicType":{"@id":"4NvzjulEenL0i6uciPoqUQWn3xmFB6NV8jn8Rd3u","annotationValue":"Sex","comments":[],"termAccession":"","termSource":""}},{"@id":"ckWn7OLUT8oddpV7c5wlAhWzZKOWJ2rc9Atk6Kgv","characteristicType":{"@id":"KDpgw0pDlLHtAJkV7Jw6VNfPUV7IJPPX15B9aQWK","annotationValue":"Strain","comments":[],"termAccession":"","termSource":""}},{"@id":"GkVM3ErqJoJzYEwMqQtm23ugJtXghhe2hrOB1p5I","characteristicType":{"@id":"Ve4pbXmc8jh7EC4tbzRr0Yu7zwIMi03IqhfmvjYV","annotationValue":"age","comments":[],"termAccession":"","termSource":""}}],"comments":[{"name":"Acknowledgments","value":"We would like to thank Nanoracks and Space Florida for initiating these studies with their award to us of the vented fly box."},{"name":"DOI","value":"10.26030/xh8y-yz34"},{"name":"Data Source Accession","value":""},{"name":"Data Source Link","value":""},{"name":"Experiment Platform","value":"NanoRack"},{"name":"Flight Program","value":"International Space Station (ISS)"},{"name":"Funding","value":"This work was supported in part by the following grants: K.O., NASA NN13AN38694, AHA SDG 0835243N, NIH HL132241, and NIA AG061598; R.B., NASA NN13AN38694, NIA AG058075, and NIH HL05432 and HL149992; and S.B., NASA NN13AN38694 and A.M., R01 HL137100"},{"name":"Identifiers","value":""},{"name":"Managing NASA Center","value":"Ames Research Center (ARC)"},{"name":"Mission End","value":"07/03/2017"},{"name":"Mission Link","value":"https://osdr.nasa.gov/bio/repo/data/missions/SpaceX-11"},{"name":"Mission Name","value":"SpaceX-11"},{"name":"Mission Start","value":"06/03/2017"},{"name":"Project Identifier","value":"FFL-02"},{"name":"Project Link","value":"https://lsda.jsc.nasa.gov/Experiment/exper/13465"},{"name":"Project Title","value":"The Effects of Microgravity on Cardiac Function Structure and Gene Expression using the Drosophila Model"},{"name":"Project Type","value":"Spaceflight Study"},{"name":"Space Program","value":"NASA"},{"name":"Study Grant Number","value":"NN13AN38694 SDG 0835243N HL132241 HL05432 HL149992 AG058075 AG061598"}],"description":"Canton S laboratory wildtype lines (Bloomington Stock Center) and a K+ channel mutant seizure (seizurets1, a gift from Dr. Barry Ganetsky, published in Titus et al., 1997), a homolog of human hERG, were used in this study. Flies launched to the International Space Station and the corresponding ground controls were housed in polystyrene vials (75 x24 mm) with 10 ml of standard cornmeal-based fly food containing double the usual amount of 10% Tegosept and cellulose acetate plugs. Approximately 24 hours prior to launch, 15 vials were each loaded with 10 virgin females and 5 male adult flies. Loaded vials were placed in a Plexiglas tray and inserted into a vented fly box (VFB), a modified version of a Nanoracks box. The VFB was placed into a canvas case for loading into the Dragon capsule. Launch of SpaceX CRS-3 occurred at 19:25 UTC on April 18, 2014. Flies were kept in the VFB throughout the 30-day mission and were stored aboard the docked Dragon capsule that shared atmosphere with the ISS. The Dragon capsule unberthed at 13:26 UTC (Co-ordinated Universal Time) on May 18, 2014 and re-entry into the Earth\u2019s atmosphere occurred the same day at 19:05 UTC. Following retrieval of the Dragon capsule off the coast of Mexico, the VFB was offloaded at Long Beach Port, California and transported by car to La Jolla, California in a climate-controlled vehicle. Surviving adult flies born on the ISS were collected from the vials at 23:30 UTC on May 20, 2014. Data collection, which included negative geotaxis assays, heart function studies, tissue collection for RNAseq, and tissue preservation for immunohistochemistry, was completed by 07:30 UTC on May 21, 2014 on all microg spaceflown and corresponding ground control flies. The VFB was oriented such that the g\u2010load was directed down into the food supply located at the bottom of the vials. This orientation was maintained throughout the entirety of the mission, from point of transfer at the lab at NASA Kennedy Space Center through stowage on the Dragon capsule, and again from Dragon un-berthing to opening of the VFB in the lab at SBP Medical Discovery Institute in La Jolla, California. Ground control flies were prepared and reared under identical conditions in ground-based incubators with temperature and humidity controlled to levels recorded on the ISS.","factors":[{"@id":"rrAHixexWAdqOKNaj15Ezk66kWZSMcprcBRZfg1k","comments":[],"factorName":"Spaceflight","factorType":{"@id":"XJ2x9G5FYOhyGGbYDO0xkevuzcPxPnzdf1nFa9fv","annotationValue":"Space Flight","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D013026","termSource":"MESH"}},{"@id":"V2XSGFfD6LJDb1O5A9sAxTihUDYIrLAJSBWJJ8s7","comments":[],"factorName":"Genotype","factorType":{"@id":"HMpQOcIqisO6kp87IfwrNhpm30wCmHZV3RjaMIXS","annotationValue":"genotype","comments":[],"termAccession":"http://www.ebi.ac.uk/efo/EFO_0000513","termSource":"EFO"}}],"identifier":"OSD-347","materials":{"otherMaterials":[],"samples":[{"@id":"#sample/140227415250448","characteristics":[{"category":{"@id":"399SzhBQzExSjIr4pjc31bssabQKEbyJxfwbrlYi"},"value":{"@id":"zqKk5bdXuNyksKKxoyi9xqOA4ULpewhpat406I7I","annotationValue":"Drosophila melanogaster","comments":[],"termAccession":"http://purl.bioontology.org/ontology/NCBITAXON/7227","termSource":"NCBITAXON"}},{"category":{"@id":"ckWn7OLUT8oddpV7c5wlAhWzZKOWJ2rc9Atk6Kgv"},"value":{"@id":"3Q0UXLc3Ll28gi5Y9xsNtsjTh7VdiwL66jfmlgES","annotationValue":"Canton-S","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"category":{"@id":"KCzWlZo7KEPqFn8gM6YdlLjQ41WWXWTC5I7BYv8U"},"value":{"@id":"wYfmNXXKA89HVKoGYL5zHDatYawmSRUyCIyyPoNz","annotationValue":"Female","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D005260","termSource":"MESH"}},{"category":{"@id":"GkVM3ErqJoJzYEwMqQtm23ugJtXghhe2hrOB1p5I"},"unit":{"@id":"EN78WNpG5NZElsP9sj1OVW0TMS8NNuDr1mEzIqd2"},"value":"1 to 3"},{"category":{"@id":"49juZ4FGB57I9ooIymVnW2cIJgBOgOHjamafkg30"},"value":{"@id":"4JQIlRv4pgRkb0Kf7atvxhWUrPuqcjNxWuIzJVHu","annotationValue":"Heart","comments":[],"termAccession":"http://purl.org/sig/ont/fma/fma7088","termSource":"FMA"}}],"derivesFrom":[],"factorValues":[{"@id":"","category":{"@id":"V2XSGFfD6LJDb1O5A9sAxTihUDYIrLAJSBWJJ8s7"},"value":{"@id":"XoqDPitRzVYowUx9J8oZ2RDMXeXbRRTt4WttLvv2","annotationValue":"Wild Type","comments":[],"termAccession":"http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C62195","termSource":"NCIT"}},{"@id":"","category":{"@id":"rrAHixexWAdqOKNaj15Ezk66kWZSMcprcBRZfg1k"},"value":{"@id":"XJ2x9G5FYOhyGGbYDO0xkevuzcPxPnzdf1nFa9fv","annotationValue":"Space Flight","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D013026","termSource":"MESH"}}],"name":"CS_FLT_1"},{"@id":"#sample/140227415251504","characteristics":[{"category":{"@id":"399SzhBQzExSjIr4pjc31bssabQKEbyJxfwbrlYi"},"value":{"@id":"zqKk5bdXuNyksKKxoyi9xqOA4ULpewhpat406I7I","annotationValue":"Drosophila melanogaster","comments":[],"termAccession":"http://purl.bioontology.org/ontology/NCBITAXON/7227","termSource":"NCBITAXON"}},{"category":{"@id":"ckWn7OLUT8oddpV7c5wlAhWzZKOWJ2rc9Atk6Kgv"},"value":{"@id":"3Q0UXLc3Ll28gi5Y9xsNtsjTh7VdiwL66jfmlgES","annotationValue":"Canton-S","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"category":{"@id":"KCzWlZo7KEPqFn8gM6YdlLjQ41WWXWTC5I7BYv8U"},"value":{"@id":"wYfmNXXKA89HVKoGYL5zHDatYawmSRUyCIyyPoNz","annotationValue":"Female","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D005260","termSource":"MESH"}},{"category":{"@id":"GkVM3ErqJoJzYEwMqQtm23ugJtXghhe2hrOB1p5I"},"unit":{"@id":"EN78WNpG5NZElsP9sj1OVW0TMS8NNuDr1mEzIqd2"},"value":"1 to 3"},{"category":{"@id":"49juZ4FGB57I9ooIymVnW2cIJgBOgOHjamafkg30"},"value":{"@id":"4JQIlRv4pgRkb0Kf7atvxhWUrPuqcjNxWuIzJVHu","annotationValue":"Heart","comments":[],"termAccession":"http://purl.org/sig/ont/fma/fma7088","termSource":"FMA"}}],"derivesFrom":[],"factorValues":[{"@id":"","category":{"@id":"V2XSGFfD6LJDb1O5A9sAxTihUDYIrLAJSBWJJ8s7"},"value":{"@id":"XoqDPitRzVYowUx9J8oZ2RDMXeXbRRTt4WttLvv2","annotationValue":"Wild Type","comments":[],"termAccession":"http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C62195","termSource":"NCIT"}},{"@id":"","category":{"@id":"rrAHixexWAdqOKNaj15Ezk66kWZSMcprcBRZfg1k"},"value":{"@id":"XJ2x9G5FYOhyGGbYDO0xkevuzcPxPnzdf1nFa9fv","annotationValue":"Space Flight","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D013026","termSource":"MESH"}}],"name":"CS_FLT_2"},{"@id":"#sample/140227415251600","characteristics":[{"category":{"@id":"399SzhBQzExSjIr4pjc31bssabQKEbyJxfwbrlYi"},"value":{"@id":"zqKk5bdXuNyksKKxoyi9xqOA4ULpewhpat406I7I","annotationValue":"Drosophila melanogaster","comments":[],"termAccession":"http://purl.bioontology.org/ontology/NCBITAXON/7227","termSource":"NCBITAXON"}},{"category":{"@id":"ckWn7OLUT8oddpV7c5wlAhWzZKOWJ2rc9Atk6Kgv"},"value":{"@id":"3Q0UXLc3Ll28gi5Y9xsNtsjTh7VdiwL66jfmlgES","annotationValue":"Canton-S","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"category":{"@id":"KCzWlZo7KEPqFn8gM6YdlLjQ41WWXWTC5I7BYv8U"},"value":{"@id":"wYfmNXXKA89HVKoGYL5zHDatYawmSRUyCIyyPoNz","annotationValue":"Female","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D005260","termSource":"MESH"}},{"category":{"@id":"GkVM3ErqJoJzYEwMqQtm23ugJtXghhe2hrOB1p5I"},"unit":{"@id":"EN78WNpG5NZElsP9sj1OVW0TMS8NNuDr1mEzIqd2"},"value":"1 to 3"},{"category":{"@id":"49juZ4FGB57I9ooIymVnW2cIJgBOgOHjamafkg30"},"value":{"@id":"4JQIlRv4pgRkb0Kf7atvxhWUrPuqcjNxWuIzJVHu","annotationValue":"Heart","comments":[],"termAccession":"http://purl.org/sig/ont/fma/fma7088","termSource":"FMA"}}],"derivesFrom":[],"factorValues":[{"@id":"","category":{"@id":"V2XSGFfD6LJDb1O5A9sAxTihUDYIrLAJSBWJJ8s7"},"value":{"@id":"XoqDPitRzVYowUx9J8oZ2RDMXeXbRRTt4WttLvv2","annotationValue":"Wild Type","comments":[],"termAccession":"http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C62195","termSource":"NCIT"}},{"@id":"","category":{"@id":"rrAHixexWAdqOKNaj15Ezk66kWZSMcprcBRZfg1k"},"value":{"@id":"XJ2x9G5FYOhyGGbYDO0xkevuzcPxPnzdf1nFa9fv","annotationValue":"Space Flight","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D013026","termSource":"MESH"}}],"name":"CS_FLT_3"},{"@id":"#sample/140227415252272","characteristics":[{"category":{"@id":"399SzhBQzExSjIr4pjc31bssabQKEbyJxfwbrlYi"},"value":{"@id":"zqKk5bdXuNyksKKxoyi9xqOA4ULpewhpat406I7I","annotationValue":"Drosophila melanogaster","comments":[],"termAccession":"http://purl.bioontology.org/ontology/NCBITAXON/7227","termSource":"NCBITAXON"}},{"category":{"@id":"ckWn7OLUT8oddpV7c5wlAhWzZKOWJ2rc9Atk6Kgv"},"value":{"@id":"3Q0UXLc3Ll28gi5Y9xsNtsjTh7VdiwL66jfmlgES","annotationValue":"Canton-S","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"category":{"@id":"KCzWlZo7KEPqFn8gM6YdlLjQ41WWXWTC5I7BYv8U"},"value":{"@id":"wYfmNXXKA89HVKoGYL5zHDatYawmSRUyCIyyPoNz","annotationValue":"Female","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D005260","termSource":"MESH"}},{"category":{"@id":"GkVM3ErqJoJzYEwMqQtm23ugJtXghhe2hrOB1p5I"},"unit":{"@id":"EN78WNpG5NZElsP9sj1OVW0TMS8NNuDr1mEzIqd2"},"value":"1 to 3"},{"category":{"@id":"49juZ4FGB57I9ooIymVnW2cIJgBOgOHjamafkg30"},"value":{"@id":"4JQIlRv4pgRkb0Kf7atvxhWUrPuqcjNxWuIzJVHu","annotationValue":"Heart","comments":[],"termAccession":"http://purl.org/sig/ont/fma/fma7088","termSource":"FMA"}}],"derivesFrom":[],"factorValues":[{"@id":"","category":{"@id":"V2XSGFfD6LJDb1O5A9sAxTihUDYIrLAJSBWJJ8s7"},"value":{"@id":"XoqDPitRzVYowUx9J8oZ2RDMXeXbRRTt4WttLvv2","annotationValue":"Wild Type","comments":[],"termAccession":"http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C62195","termSource":"NCIT"}},{"@id":"","category":{"@id":"rrAHixexWAdqOKNaj15Ezk66kWZSMcprcBRZfg1k"},"value":{"@id":"uSz5i4QBr7uZce9ezDEYPeTPfWANK23t9aUzRnAy","annotationValue":"Ground Control","comments":[],"termAccession":"","termSource":""}}],"name":"CS_GC_1"},{"@id":"#sample/140227415251312","characteristics":[{"category":{"@id":"399SzhBQzExSjIr4pjc31bssabQKEbyJxfwbrlYi"},"value":{"@id":"zqKk5bdXuNyksKKxoyi9xqOA4ULpewhpat406I7I","annotationValue":"Drosophila melanogaster","comments":[],"termAccession":"http://purl.bioontology.org/ontology/NCBITAXON/7227","termSource":"NCBITAXON"}},{"category":{"@id":"ckWn7OLUT8oddpV7c5wlAhWzZKOWJ2rc9Atk6Kgv"},"value":{"@id":"3Q0UXLc3Ll28gi5Y9xsNtsjTh7VdiwL66jfmlgES","annotationValue":"Canton-S","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"category":{"@id":"KCzWlZo7KEPqFn8gM6YdlLjQ41WWXWTC5I7BYv8U"},"value":{"@id":"wYfmNXXKA89HVKoGYL5zHDatYawmSRUyCIyyPoNz","annotationValue":"Female","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D005260","termSource":"MESH"}},{"category":{"@id":"GkVM3ErqJoJzYEwMqQtm23ugJtXghhe2hrOB1p5I"},"unit":{"@id":"EN78WNpG5NZElsP9sj1OVW0TMS8NNuDr1mEzIqd2"},"value":"1 to 3"},{"category":{"@id":"49juZ4FGB57I9ooIymVnW2cIJgBOgOHjamafkg30"},"value":{"@id":"4JQIlRv4pgRkb0Kf7atvxhWUrPuqcjNxWuIzJVHu","annotationValue":"Heart","comments":[],"termAccession":"http://purl.org/sig/ont/fma/fma7088","termSource":"FMA"}}],"derivesFrom":[],"factorValues":[{"@id":"","category":{"@id":"V2XSGFfD6LJDb1O5A9sAxTihUDYIrLAJSBWJJ8s7"},"value":{"@id":"XoqDPitRzVYowUx9J8oZ2RDMXeXbRRTt4WttLvv2","annotationValue":"Wild Type","comments":[],"termAccession":"http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C62195","termSource":"NCIT"}},{"@id":"","category":{"@id":"rrAHixexWAdqOKNaj15Ezk66kWZSMcprcBRZfg1k"},"value":{"@id":"uSz5i4QBr7uZce9ezDEYPeTPfWANK23t9aUzRnAy","annotationValue":"Ground Control","comments":[],"termAccession":"","termSource":""}}],"name":"CS_GC_2"},{"@id":"#sample/140227415251744","characteristics":[{"category":{"@id":"399SzhBQzExSjIr4pjc31bssabQKEbyJxfwbrlYi"},"value":{"@id":"zqKk5bdXuNyksKKxoyi9xqOA4ULpewhpat406I7I","annotationValue":"Drosophila melanogaster","comments":[],"termAccession":"http://purl.bioontology.org/ontology/NCBITAXON/7227","termSource":"NCBITAXON"}},{"category":{"@id":"ckWn7OLUT8oddpV7c5wlAhWzZKOWJ2rc9Atk6Kgv"},"value":{"@id":"3Q0UXLc3Ll28gi5Y9xsNtsjTh7VdiwL66jfmlgES","annotationValue":"Canton-S","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"category":{"@id":"KCzWlZo7KEPqFn8gM6YdlLjQ41WWXWTC5I7BYv8U"},"value":{"@id":"wYfmNXXKA89HVKoGYL5zHDatYawmSRUyCIyyPoNz","annotationValue":"Female","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D005260","termSource":"MESH"}},{"category":{"@id":"GkVM3ErqJoJzYEwMqQtm23ugJtXghhe2hrOB1p5I"},"unit":{"@id":"EN78WNpG5NZElsP9sj1OVW0TMS8NNuDr1mEzIqd2"},"value":"1 to 3"},{"category":{"@id":"49juZ4FGB57I9ooIymVnW2cIJgBOgOHjamafkg30"},"value":{"@id":"4JQIlRv4pgRkb0Kf7atvxhWUrPuqcjNxWuIzJVHu","annotationValue":"Heart","comments":[],"termAccession":"http://purl.org/sig/ont/fma/fma7088","termSource":"FMA"}}],"derivesFrom":[],"factorValues":[{"@id":"","category":{"@id":"V2XSGFfD6LJDb1O5A9sAxTihUDYIrLAJSBWJJ8s7"},"value":{"@id":"XoqDPitRzVYowUx9J8oZ2RDMXeXbRRTt4WttLvv2","annotationValue":"Wild Type","comments":[],"termAccession":"http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C62195","termSource":"NCIT"}},{"@id":"","category":{"@id":"rrAHixexWAdqOKNaj15Ezk66kWZSMcprcBRZfg1k"},"value":{"@id":"uSz5i4QBr7uZce9ezDEYPeTPfWANK23t9aUzRnAy","annotationValue":"Ground Control","comments":[],"termAccession":"","termSource":""}}],"name":"CS_GC_3"},{"@id":"#sample/140227415252032","characteristics":[{"category":{"@id":"399SzhBQzExSjIr4pjc31bssabQKEbyJxfwbrlYi"},"value":{"@id":"zqKk5bdXuNyksKKxoyi9xqOA4ULpewhpat406I7I","annotationValue":"Drosophila melanogaster","comments":[],"termAccession":"http://purl.bioontology.org/ontology/NCBITAXON/7227","termSource":"NCBITAXON"}},{"category":{"@id":"ckWn7OLUT8oddpV7c5wlAhWzZKOWJ2rc9Atk6Kgv"},"value":{"@id":"3Q0UXLc3Ll28gi5Y9xsNtsjTh7VdiwL66jfmlgES","annotationValue":"Canton-S","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"category":{"@id":"KCzWlZo7KEPqFn8gM6YdlLjQ41WWXWTC5I7BYv8U"},"value":{"@id":"wYfmNXXKA89HVKoGYL5zHDatYawmSRUyCIyyPoNz","annotationValue":"Female","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D005260","termSource":"MESH"}},{"category":{"@id":"GkVM3ErqJoJzYEwMqQtm23ugJtXghhe2hrOB1p5I"},"unit":{"@id":"EN78WNpG5NZElsP9sj1OVW0TMS8NNuDr1mEzIqd2"},"value":"1 to 3"},{"category":{"@id":"49juZ4FGB57I9ooIymVnW2cIJgBOgOHjamafkg30"},"value":{"@id":"4JQIlRv4pgRkb0Kf7atvxhWUrPuqcjNxWuIzJVHu","annotationValue":"Heart","comments":[],"termAccession":"http://purl.org/sig/ont/fma/fma7088","termSource":"FMA"}}],"derivesFrom":[],"factorValues":[{"@id":"","category":{"@id":"V2XSGFfD6LJDb1O5A9sAxTihUDYIrLAJSBWJJ8s7"},"value":{"@id":"MoW5dNuCkN09ArHzdIy2yGa5bL5oyO1zVhBUP6yS","annotationValue":"seizure channel mutant","comments":[],"termAccession":"","termSource":""}},{"@id":"","category":{"@id":"rrAHixexWAdqOKNaj15Ezk66kWZSMcprcBRZfg1k"},"value":{"@id":"XJ2x9G5FYOhyGGbYDO0xkevuzcPxPnzdf1nFa9fv","annotationValue":"Space Flight","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D013026","termSource":"MESH"}}],"name":"Seits1_FLT_1"},{"@id":"#sample/140227415252800","characteristics":[{"category":{"@id":"399SzhBQzExSjIr4pjc31bssabQKEbyJxfwbrlYi"},"value":{"@id":"zqKk5bdXuNyksKKxoyi9xqOA4ULpewhpat406I7I","annotationValue":"Drosophila melanogaster","comments":[],"termAccession":"http://purl.bioontology.org/ontology/NCBITAXON/7227","termSource":"NCBITAXON"}},{"category":{"@id":"ckWn7OLUT8oddpV7c5wlAhWzZKOWJ2rc9Atk6Kgv"},"value":{"@id":"3Q0UXLc3Ll28gi5Y9xsNtsjTh7VdiwL66jfmlgES","annotationValue":"Canton-S","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"category":{"@id":"KCzWlZo7KEPqFn8gM6YdlLjQ41WWXWTC5I7BYv8U"},"value":{"@id":"wYfmNXXKA89HVKoGYL5zHDatYawmSRUyCIyyPoNz","annotationValue":"Female","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D005260","termSource":"MESH"}},{"category":{"@id":"GkVM3ErqJoJzYEwMqQtm23ugJtXghhe2hrOB1p5I"},"unit":{"@id":"EN78WNpG5NZElsP9sj1OVW0TMS8NNuDr1mEzIqd2"},"value":"1 to 3"},{"category":{"@id":"49juZ4FGB57I9ooIymVnW2cIJgBOgOHjamafkg30"},"value":{"@id":"4JQIlRv4pgRkb0Kf7atvxhWUrPuqcjNxWuIzJVHu","annotationValue":"Heart","comments":[],"termAccession":"http://purl.org/sig/ont/fma/fma7088","termSource":"FMA"}}],"derivesFrom":[],"factorValues":[{"@id":"","category":{"@id":"V2XSGFfD6LJDb1O5A9sAxTihUDYIrLAJSBWJJ8s7"},"value":{"@id":"MoW5dNuCkN09ArHzdIy2yGa5bL5oyO1zVhBUP6yS","annotationValue":"seizure channel mutant","comments":[],"termAccession":"","termSource":""}},{"@id":"","category":{"@id":"rrAHixexWAdqOKNaj15Ezk66kWZSMcprcBRZfg1k"},"value":{"@id":"XJ2x9G5FYOhyGGbYDO0xkevuzcPxPnzdf1nFa9fv","annotationValue":"Space Flight","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D013026","termSource":"MESH"}}],"name":"Seits1_FLT_2"},{"@id":"#sample/140227415249632","characteristics":[{"category":{"@id":"399SzhBQzExSjIr4pjc31bssabQKEbyJxfwbrlYi"},"value":{"@id":"zqKk5bdXuNyksKKxoyi9xqOA4ULpewhpat406I7I","annotationValue":"Drosophila melanogaster","comments":[],"termAccession":"http://purl.bioontology.org/ontology/NCBITAXON/7227","termSource":"NCBITAXON"}},{"category":{"@id":"ckWn7OLUT8oddpV7c5wlAhWzZKOWJ2rc9Atk6Kgv"},"value":{"@id":"3Q0UXLc3Ll28gi5Y9xsNtsjTh7VdiwL66jfmlgES","annotationValue":"Canton-S","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"category":{"@id":"KCzWlZo7KEPqFn8gM6YdlLjQ41WWXWTC5I7BYv8U"},"value":{"@id":"wYfmNXXKA89HVKoGYL5zHDatYawmSRUyCIyyPoNz","annotationValue":"Female","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D005260","termSource":"MESH"}},{"category":{"@id":"GkVM3ErqJoJzYEwMqQtm23ugJtXghhe2hrOB1p5I"},"unit":{"@id":"EN78WNpG5NZElsP9sj1OVW0TMS8NNuDr1mEzIqd2"},"value":"1 to 3"},{"category":{"@id":"49juZ4FGB57I9ooIymVnW2cIJgBOgOHjamafkg30"},"value":{"@id":"4JQIlRv4pgRkb0Kf7atvxhWUrPuqcjNxWuIzJVHu","annotationValue":"Heart","comments":[],"termAccession":"http://purl.org/sig/ont/fma/fma7088","termSource":"FMA"}}],"derivesFrom":[],"factorValues":[{"@id":"","category":{"@id":"V2XSGFfD6LJDb1O5A9sAxTihUDYIrLAJSBWJJ8s7"},"value":{"@id":"MoW5dNuCkN09ArHzdIy2yGa5bL5oyO1zVhBUP6yS","annotationValue":"seizure channel mutant","comments":[],"termAccession":"","termSource":""}},{"@id":"","category":{"@id":"rrAHixexWAdqOKNaj15Ezk66kWZSMcprcBRZfg1k"},"value":{"@id":"XJ2x9G5FYOhyGGbYDO0xkevuzcPxPnzdf1nFa9fv","annotationValue":"Space Flight","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D013026","termSource":"MESH"}}],"name":"Seits1_FLT_3"},{"@id":"#sample/140227415252944","characteristics":[{"category":{"@id":"399SzhBQzExSjIr4pjc31bssabQKEbyJxfwbrlYi"},"value":{"@id":"zqKk5bdXuNyksKKxoyi9xqOA4ULpewhpat406I7I","annotationValue":"Drosophila melanogaster","comments":[],"termAccession":"http://purl.bioontology.org/ontology/NCBITAXON/7227","termSource":"NCBITAXON"}},{"category":{"@id":"ckWn7OLUT8oddpV7c5wlAhWzZKOWJ2rc9Atk6Kgv"},"value":{"@id":"3Q0UXLc3Ll28gi5Y9xsNtsjTh7VdiwL66jfmlgES","annotationValue":"Canton-S","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"category":{"@id":"KCzWlZo7KEPqFn8gM6YdlLjQ41WWXWTC5I7BYv8U"},"value":{"@id":"wYfmNXXKA89HVKoGYL5zHDatYawmSRUyCIyyPoNz","annotationValue":"Female","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D005260","termSource":"MESH"}},{"category":{"@id":"GkVM3ErqJoJzYEwMqQtm23ugJtXghhe2hrOB1p5I"},"unit":{"@id":"EN78WNpG5NZElsP9sj1OVW0TMS8NNuDr1mEzIqd2"},"value":"1 to 3"},{"category":{"@id":"49juZ4FGB57I9ooIymVnW2cIJgBOgOHjamafkg30"},"value":{"@id":"4JQIlRv4pgRkb0Kf7atvxhWUrPuqcjNxWuIzJVHu","annotationValue":"Heart","comments":[],"termAccession":"http://purl.org/sig/ont/fma/fma7088","termSource":"FMA"}}],"derivesFrom":[],"factorValues":[{"@id":"","category":{"@id":"V2XSGFfD6LJDb1O5A9sAxTihUDYIrLAJSBWJJ8s7"},"value":{"@id":"MoW5dNuCkN09ArHzdIy2yGa5bL5oyO1zVhBUP6yS","annotationValue":"seizure channel mutant","comments":[],"termAccession":"","termSource":""}},{"@id":"","category":{"@id":"rrAHixexWAdqOKNaj15Ezk66kWZSMcprcBRZfg1k"},"value":{"@id":"XJ2x9G5FYOhyGGbYDO0xkevuzcPxPnzdf1nFa9fv","annotationValue":"Space Flight","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D013026","termSource":"MESH"}}],"name":"Seits1_FLT_4"},{"@id":"#sample/140227415251120","characteristics":[{"category":{"@id":"399SzhBQzExSjIr4pjc31bssabQKEbyJxfwbrlYi"},"value":{"@id":"zqKk5bdXuNyksKKxoyi9xqOA4ULpewhpat406I7I","annotationValue":"Drosophila melanogaster","comments":[],"termAccession":"http://purl.bioontology.org/ontology/NCBITAXON/7227","termSource":"NCBITAXON"}},{"category":{"@id":"ckWn7OLUT8oddpV7c5wlAhWzZKOWJ2rc9Atk6Kgv"},"value":{"@id":"3Q0UXLc3Ll28gi5Y9xsNtsjTh7VdiwL66jfmlgES","annotationValue":"Canton-S","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"category":{"@id":"KCzWlZo7KEPqFn8gM6YdlLjQ41WWXWTC5I7BYv8U"},"value":{"@id":"wYfmNXXKA89HVKoGYL5zHDatYawmSRUyCIyyPoNz","annotationValue":"Female","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D005260","termSource":"MESH"}},{"category":{"@id":"GkVM3ErqJoJzYEwMqQtm23ugJtXghhe2hrOB1p5I"},"unit":{"@id":"EN78WNpG5NZElsP9sj1OVW0TMS8NNuDr1mEzIqd2"},"value":"1 to 3"},{"category":{"@id":"49juZ4FGB57I9ooIymVnW2cIJgBOgOHjamafkg30"},"value":{"@id":"4JQIlRv4pgRkb0Kf7atvxhWUrPuqcjNxWuIzJVHu","annotationValue":"Heart","comments":[],"termAccession":"http://purl.org/sig/ont/fma/fma7088","termSource":"FMA"}}],"derivesFrom":[],"factorValues":[{"@id":"","category":{"@id":"V2XSGFfD6LJDb1O5A9sAxTihUDYIrLAJSBWJJ8s7"},"value":{"@id":"MoW5dNuCkN09ArHzdIy2yGa5bL5oyO1zVhBUP6yS","annotationValue":"seizure channel mutant","comments":[],"termAccession":"","termSource":""}},{"@id":"","category":{"@id":"rrAHixexWAdqOKNaj15Ezk66kWZSMcprcBRZfg1k"},"value":{"@id":"uSz5i4QBr7uZce9ezDEYPeTPfWANK23t9aUzRnAy","annotationValue":"Ground Control","comments":[],"termAccession":"","termSource":""}}],"name":"Seits1_GC_1"},{"@id":"#sample/140227415251888","characteristics":[{"category":{"@id":"399SzhBQzExSjIr4pjc31bssabQKEbyJxfwbrlYi"},"value":{"@id":"zqKk5bdXuNyksKKxoyi9xqOA4ULpewhpat406I7I","annotationValue":"Drosophila melanogaster","comments":[],"termAccession":"http://purl.bioontology.org/ontology/NCBITAXON/7227","termSource":"NCBITAXON"}},{"category":{"@id":"ckWn7OLUT8oddpV7c5wlAhWzZKOWJ2rc9Atk6Kgv"},"value":{"@id":"3Q0UXLc3Ll28gi5Y9xsNtsjTh7VdiwL66jfmlgES","annotationValue":"Canton-S","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"category":{"@id":"KCzWlZo7KEPqFn8gM6YdlLjQ41WWXWTC5I7BYv8U"},"value":{"@id":"wYfmNXXKA89HVKoGYL5zHDatYawmSRUyCIyyPoNz","annotationValue":"Female","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D005260","termSource":"MESH"}},{"category":{"@id":"GkVM3ErqJoJzYEwMqQtm23ugJtXghhe2hrOB1p5I"},"unit":{"@id":"EN78WNpG5NZElsP9sj1OVW0TMS8NNuDr1mEzIqd2"},"value":"1 to 3"},{"category":{"@id":"49juZ4FGB57I9ooIymVnW2cIJgBOgOHjamafkg30"},"value":{"@id":"4JQIlRv4pgRkb0Kf7atvxhWUrPuqcjNxWuIzJVHu","annotationValue":"Heart","comments":[],"termAccession":"http://purl.org/sig/ont/fma/fma7088","termSource":"FMA"}}],"derivesFrom":[],"factorValues":[{"@id":"","category":{"@id":"V2XSGFfD6LJDb1O5A9sAxTihUDYIrLAJSBWJJ8s7"},"value":{"@id":"MoW5dNuCkN09ArHzdIy2yGa5bL5oyO1zVhBUP6yS","annotationValue":"seizure channel mutant","comments":[],"termAccession":"","termSource":""}},{"@id":"","category":{"@id":"rrAHixexWAdqOKNaj15Ezk66kWZSMcprcBRZfg1k"},"value":{"@id":"uSz5i4QBr7uZce9ezDEYPeTPfWANK23t9aUzRnAy","annotationValue":"Ground Control","comments":[],"termAccession":"","termSource":""}}],"name":"Seits1_GC_2"},{"@id":"#sample/140227415249344","characteristics":[{"category":{"@id":"399SzhBQzExSjIr4pjc31bssabQKEbyJxfwbrlYi"},"value":{"@id":"zqKk5bdXuNyksKKxoyi9xqOA4ULpewhpat406I7I","annotationValue":"Drosophila melanogaster","comments":[],"termAccession":"http://purl.bioontology.org/ontology/NCBITAXON/7227","termSource":"NCBITAXON"}},{"category":{"@id":"ckWn7OLUT8oddpV7c5wlAhWzZKOWJ2rc9Atk6Kgv"},"value":{"@id":"3Q0UXLc3Ll28gi5Y9xsNtsjTh7VdiwL66jfmlgES","annotationValue":"Canton-S","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"category":{"@id":"KCzWlZo7KEPqFn8gM6YdlLjQ41WWXWTC5I7BYv8U"},"value":{"@id":"wYfmNXXKA89HVKoGYL5zHDatYawmSRUyCIyyPoNz","annotationValue":"Female","comments":[],"termAccession":"http://purl.bioontology.org/ontology/MESH/D005260","termSource":"MESH"}},{"category":{"@id":"GkVM3ErqJoJzYEwMqQtm23ugJtXghhe2hrOB1p5I"},"unit":{"@id":"EN78WNpG5NZElsP9sj1OVW0TMS8NNuDr1mEzIqd2"},"value":"1 to 3"},{"category":{"@id":"49juZ4FGB57I9ooIymVnW2cIJgBOgOHjamafkg30"},"value":{"@id":"4JQIlRv4pgRkb0Kf7atvxhWUrPuqcjNxWuIzJVHu","annotationValue":"Heart","comments":[],"termAccession":"http://purl.org/sig/ont/fma/fma7088","termSource":"FMA"}}],"derivesFrom":[],"factorValues":[{"@id":"","category":{"@id":"V2XSGFfD6LJDb1O5A9sAxTihUDYIrLAJSBWJJ8s7"},"value":{"@id":"MoW5dNuCkN09ArHzdIy2yGa5bL5oyO1zVhBUP6yS","annotationValue":"seizure channel mutant","comments":[],"termAccession":"","termSource":""}},{"@id":"","category":{"@id":"rrAHixexWAdqOKNaj15Ezk66kWZSMcprcBRZfg1k"},"value":{"@id":"uSz5i4QBr7uZce9ezDEYPeTPfWANK23t9aUzRnAy","annotationValue":"Ground Control","comments":[],"termAccession":"","termSource":""}}],"name":"Seits1_GC_3"}],"sources":[{"@id":"#source/140227422273056","characteristics":[],"name":"CS Ground Control 1"},{"@id":"#source/140227422271040","characteristics":[],"name":"CS Ground Control 2"},{"@id":"#source/140227422271472","characteristics":[],"name":"CS Ground Control 3"},{"@id":"#source/140227422272912","characteristics":[],"name":"CS Space Flown 1"},{"@id":"#source/140227422269600","characteristics":[],"name":"CS Space Flown 2"},{"@id":"#source/140227422271424","characteristics":[],"name":"CS Space Flown 3"},{"@id":"#source/140227422273392","characteristics":[],"name":"Sei ts1 Ground Control 1"},{"@id":"#source/140227422271328","characteristics":[],"name":"Sei ts1 Ground Control 2"},{"@id":"#source/140227422269504","characteristics":[],"name":"Sei ts1 Ground Control 3"},{"@id":"#source/140227422271280","characteristics":[],"name":"Sei ts1 Space Flown 1"},{"@id":"#source/140227422269552","characteristics":[],"name":"Sei ts1 Space Flown 2"},{"@id":"#source/140227415251936","characteristics":[],"name":"Sei ts1 Space Flown 3"},{"@id":"#source/140227415249728","characteristics":[],"name":"Sei ts1 Space Flown 4"}]},"people":[{"@id":"","address":"10901 N. Torrey Pines Rd.; La Jolla, CA 92037","affiliation":"SBP Medical Discovery Institute","comments":[],"email":"kocorr@gmail.com","fax":"","firstName":"Karen","lastName":"Ocorr","midInitials":"","phone":"","roles":[{"@id":"HJPRq6x6GhRrWvebUJbKqTYWJMttZH85UbFKx2NQ","annotationValue":"conceptualization role","comments":[],"termAccession":"http://purl.org/credit/ontology","termSource":"CRO"}]}],"processSequence":[{"@id":"#process/140227399260864","comments":[],"date":"","executesProtocol":{"@id":"#140227424556416"},"inputs":[{"@id":"#sample/140227415252272"},{"@id":"#sample/140227415251312"},{"@id":"#sample/140227415251744"},{"@id":"#sample/140227415250448"},{"@id":"#sample/140227415251504"},{"@id":"#sample/140227415251600"},{"@id":"#sample/140227415251120"},{"@id":"#sample/140227415251888"},{"@id":"#sample/140227415249344"},{"@id":"#sample/140227415252032"},{"@id":"#sample/140227415252800"},{"@id":"#sample/140227415249632"},{"@id":"#sample/140227415252944"}],"nextProcess":{"@id":"#process/140227422272000"},"outputs":[],"parameterValues":[{"category":{"@id":"#140227424556608"},"unit":{"@id":"HD9tp2SLnR0wXOGt79HG2Wa7QP9SkYuVwR6aCHGl"},"value":"30"},{"category":{"@id":"#140227424558960"},"unit":{"@id":"rXEqs7vuV48f7fvwnkTqN785nMDguXNcuEYyqAKs"},"value":"~ 21"}],"performer":""},{"@id":"#process/140227422272000","comments":[],"date":"","executesProtocol":{"@id":"#140227424556800"},"inputs":[],"nextProcess":{"@id":"#process/140227422272816"},"outputs":[],"parameterValues":[{"category":{"@id":"#140227424556704"},"value":{"@id":"Fhjn8t86o4ghw5MVxb4WLnHwXiCCEhRUVVe2BCEj","annotationValue":"Qiazol","comments":[],"termAccession":"","termSource":""}},{"category":{"@id":"#140227424555888"},"unit":{"@id":"rXEqs7vuV48f7fvwnkTqN785nMDguXNcuEYyqAKs"},"value":"-80"}],"performer":"","previousProcess":{"@id":"#process/140227399260864"}},{"@id":"#process/140227423694656","comments":[],"date":"","executesProtocol":{"@id":"#140227424555984"},"inputs":[],"outputs":[],"parameterValues":[{"category":{"@id":"#140227424558096"},"value":{"@id":"FAVeS9jtVtLfYbAbKw5Qfs0lKKt88wngSafu8XWf","annotationValue":"non-irradiated","comments":[],"termAccession":"http://purl.obolibrary.org/obo/RBO_00005025","termSource":""}},{"category":{"@id":"#140227422269840"},"value":""},{"category":{"@id":"#140227422272768"},"value":""},{"category":{"@id":"#140227422272960"},"value":""},{"category":{"@id":"#140227422271616"},"value":{"@id":"vrSUMn65qJDtA7DMgEZvlA9WwvYZIRqL7Evu4KlS","annotationValue":"Not Applicable","comments":[],"termAccession":"http://purl.obolibrary.org/obo/NCIT_C48660","termSource":"NCIT"}},{"category":{"@id":"#140227408500672"},"value":{"@id":"vrSUMn65qJDtA7DMgEZvlA9WwvYZIRqL7Evu4KlS","annotationValue":"Not Applicable","comments":[],"termAccession":"http://purl.obolibrary.org/obo/NCIT_C48660","termSource":"NCIT"}}],"performer":"","previousProcess":{"@id":"#process/140227422272000"}},{"@id":"#process/140227422272816","comments":[],"date":"","executesProtocol":{"@id":"#140227424555984"},"inputs":[],"outputs":[],"parameterValues":[{"category":{"@id":"#140227424558096"},"value":{"@id":"QQKTSpM72bRyUZQ6ExbBfwREEBrWtKBBty1sCDSu","annotationValue":"space radiation","comments":[],"termAccession":"http://purl.obolibrary.org/obo/RBO_00000002","termSource":""}},{"category":{"@id":"#140227422269840"},"unit":{"@id":"SHRIFGDc50meal3f60aKnlHyc0mXQoqiyW1BovrZ"},"value":"10.31"},{"category":{"@id":"#140227422272768"},"unit":{"@id":"kQ7xX41a7tbtWDBfRbxYY3YI0jpDae5GiMFij6BD"},"value":"0.333"},{"category":{"@id":"#140227422272960"},"unit":{"@id":"HD9tp2SLnR0wXOGt79HG2Wa7QP9SkYuVwR6aCHGl"},"value":"30"},{"category":{"@id":"#140227422271616"},"value":{"@id":"76LPw0sSoh7rQ92Gg84mflSH6Aw1vrYqXCLbAvXD","annotationValue":"outer space","comments":[],"termAccession":"http://purl.obolibrary.org/obo/ENVO_01000637","termSource":""}},{"category":{"@id":"#140227408500672"},"value":{"@id":"luDay5rSygSRWMeRb6gsQ6AFVHrXZAKW7PrIKw7P","annotationValue":"ISS","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}}],"performer":"","previousProcess":{"@id":"#process/140227422272000"}}],"protocols":[{"@id":"#140227424556416","comments":[],"components":[],"description":"Fly lines used in this study were Canton S laboratory wildtype lines (Bloomington Stock Center) and a K+ channel mutant seizure (seizurets1, a gift from Dr. Barry Ganetsky). The sei/hERG mutants were previously isolated in a screen for ethylmethane sulfonate (EMS)-induced paralytic mutations on the second chromosome(Titus et al., 1997). Flies launched to the International Space Station and the corresponding ground controls were housed in polystyrene vials (75 x24 mm) with 10 ml of standard cornmeal-based fly food containing double the usual amount of 10% Tegosept and cellulose acetate plugs. Approximately 24 hours prior to launch, 15 vials were each loaded with 8 virgin females and 5 male adult virgin flies. Loaded vials were placed in a Plexiglas tray and inserted into a vented fly box (VFB), a modified version of a Nanoracks box. The VFB was placed into a canvas case for loading into the Dragon capsule. Launch of SpaceX CRS-3 occurred at 19:25 UTC on April 18, 2014. Flies were kept in the VFB throughout the 30-day mission and were stored aboard the docked Dragon capsule that shared atmosphere with the ISS. The Dragon capsule unberthed at 13:26 UTC (Co-ordinated Universal Time) on May 18, 2014 and re-entry into the Earth\u2019s atmosphere occurred the same day at 19:05 UTC. Following retrieval of the Dragon capsule off the coast of Mexico, the VFB was offloaded at Long Beach Port, California and transported by car to La Jolla, California in a climate-controlled vehicle. The VFB was oriented such that the g\u2010load was directed down into the food supply located at the bottom of the vials. This orientation was maintained throughout the entirety of the mission, from point of transfer at the lab at NASA Kennedy Space Center through stowage on the Dragon capsule, and again from Dragon un-berthing to opening of the VFB in the lab at SBP Medical Discovery Institute in La Jolla, California. Ground control flies were prepared and reared under identical conditions in ground-based incubators with temperature and humidity controlled to levels recorded on the ISS.","name":"treatment protocol","parameters":[{"@id":"#140227424556608","parameterName":{"@id":"ZjmSSbPuCF9KW9S9qrQGc9mjnHs9TzHb1bMgnKcX","annotationValue":"duration","comments":[],"termAccession":"http://www.ebi.ac.uk/efo/EFO_0000433","termSource":"EFO"}},{"@id":"#140227424558960","parameterName":{"@id":"VsWzzwUM9TbTlpr8jpj09BAkNRzbTtdEdXpe6nkr","annotationValue":"Housing Temperature","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}}],"protocolType":{"@id":"LqPqGCGqW30U95npRFwaWKYfnnu3IhQtYDZrgkQE","annotationValue":"treatment protocol","comments":[],"termAccession":"","termSource":""},"uri":"","version":""},{"@id":"#140227424556800","comments":[],"components":[],"description":"For each genotype, adult Drosophila were dissected under artificial hemolymph as described in (Vogler and Ocorr, 2009), on ice to expose the heart. These hearts were then carefully cleaned of surrounding fat cells, extracted, and pooled in groups of 6-15 hearts. Hearts were placed into tubes containing 300 ul of Qiazol lysis reagent, homogenized per the Qiagen protocol, flash frozen in liquid nitrogen, and transferred to - 80C for storage.","name":"sample collection","parameters":[{"@id":"#140227424556704","parameterName":{"@id":"Xv0M9pE0aUSn3kUQ9KB3uLrvghDs8N2ndH4aj4iN","annotationValue":"Sample Preservation Method","comments":[],"termAccession":"","termSource":""}},{"@id":"#140227424555888","parameterName":{"@id":"SfwXET3g26o3EFRmOAglaMjl4Hy74pLFl6SkMJ6U","annotationValue":"Sample Storage Temperature","comments":[],"termAccession":"","termSource":""}}],"protocolType":{"@id":"zaKRMPLXOBudyE1ROMNBjnZXViwkiB6PT7wea0yd","annotationValue":"sample collection","comments":[],"termAccession":"","termSource":""},"uri":"","version":""},{"@id":"#140227424555984","comments":[],"components":[],"description":"The absorbed dose of ionizing radiation received by biological payloads on the International Space Station (ISS) depends on a number of factors, including date and duration of exposure and location of the payload on the ISS. Some of the factors that lead to variations in the absorbed dose rate in orbit are ISS altitude, period during the solar cycle, and location of the sample\u2014the ISS module and the specific location within that module. Shielding effects from the biological payload container or habitat have not been taken into account. The measured absorbed dose can vary based on the dosimetry instrument(s) used. Radiation monitoring on the ISS is not standardized across modules; each international partner has its own suite of instruments, with differing technologies, sensitivities and analysis methodologies, including criteria for distinguishing between lightly ionizing particles (mainly protons) and highly ionizing particles (mainly galactic cosmic ray nuclei). Both active and passive dosimeters are used. Active dosimeters are powered and data are read out and stored and/or telemetered to ground. Some active dosimeters provide additional levels of detail such as time resolution, energy deposition and particle identification. Passive dosimeters are unpowered, record constantly and are read out upon return to the ground. The dose in the metadata is the dose recorded by the radiation detector closest to the sample. In most cases that detector will be in the same ISS module; in cases where data from a detector in the same module are not available, the dose is extrapolated using data from periods where data are available from detectors in multiple modules, including the module containing the payload. The duration of the experiment is defined as the time in space during which the specimen was \u201cliving\u201d, including the time on the delivery vehicle (e.g. SpaceX Dragon). Once the specimen was frozen or fixed, the experiment was considered stopped. Details of ISS dosimetry and a table with doses for all GeneLab ISS experiment ISS datasets are available at <a href=\"https://genelab.nasa.gov/environmental/radiation.\" target=\"_\" >https://genelab.nasa.gov/environmental/radiation.</a>","name":"radiation dosimetry","parameters":[{"@id":"#140227424558096","parameterName":{"@id":"lqLio6cqwPLox7b7EOdXHJ7fG5xPrPcfHhTTkQZ8","annotationValue":"ionizing radiation","comments":[],"termAccession":"http://purl.obolibrary.org/obo/RBO_00000116","termSource":""}},{"@id":"#140227422269840","parameterName":{"@id":"QGnq1ZBQG4r5UwZvMZGasxLy3jjaU9tV0a0umLcR","annotationValue":"absorbed radiation dose","comments":[],"termAccession":"http://purl.obolibrary.org/obo/RBO_00005010","termSource":""}},{"@id":"#140227422272768","parameterName":{"@id":"VLcA0Jh7NixB76VQ4OBV7LW1GUZ2UUZuZIXAAKG7","annotationValue":"absorbed radiation dose rate","comments":[],"termAccession":"http://purl.obolibrary.org/obo/RBO_00005011","termSource":""}},{"@id":"#140227422272960","parameterName":{"@id":"Lp5EqgE3XmDjGm9zXQ0ycUYqNGhgqk7dAGaBWOL1","annotationValue":"exposure duration","comments":[],"termAccession":"http://purl.obolibrary.org/obo/NCIT_C83280","termSource":"NCIT"}},{"@id":"#140227422271616","parameterName":{"@id":"BddYzuysUrqvYNdykuGz2QCiArMDgZ7aJoUWw5gu","annotationValue":"ionizing radiation categorized by source","comments":[],"termAccession":"http://purl.obolibrary.org/obo/RBO_00000001","termSource":""}},{"@id":"#140227408500672","parameterName":{"@id":"wxFiRV5BXWlvDgeF3X09uHa7lhc46XznlQpBu4F5","annotationValue":"vehicle","comments":[],"termAccession":"http://purl.obolibrary.org/obo/ENVO_01000604","termSource":""}}],"protocolType":{"@id":"cRIq11slUc7UNlc3Y0qx8h9422B1zHEuUuF3gRxS","annotationValue":"chronic","comments":[],"termAccession":"http://purl.obolibrary.org/obo/PATO_0001863","termSource":"OBI"},"uri":"","version":""},{"@id":"#140227424557232","comments":[],"components":[],"description":"Total RNA from each sample was extracted and purified using the miRNeasy Mini kit from Qiagen (Cat. No. 217004), yielding 173~551 ng of RNA eluted in 30 ul of RNAse free water. The integrity of the extracted RNA was assessed by Agilent 2200 Tapestation system (Agilent, Santa Clara, CA), indicating RIN numbers in the range of 8.3 to 9.6. RNA samples of high quality and sufficient RNA quantities were selected for further processing.","name":"Nucleic Acid Extraction","parameters":[{"@id":"#140227394526512","parameterName":{"@id":"Hop5C9AJDN9g3VYqtIJtB2A611oQjKFpzG6shAoZ","annotationValue":"QA Instrument","comments":[],"termAccession":"","termSource":""}},{"@id":"#140227394525120","parameterName":{"@id":"AKFULPaZzL2J22DNBTdtRb681TVpFMeJj3ziEprY","annotationValue":"QA Assay","comments":[],"termAccession":"","termSource":""}},{"@id":"#140227394525744","parameterName":{"@id":"HzDLlLTGaZjIbBNDIQmjCNLDXJ93jptTzCf2uo5X","annotationValue":"QA Score","comments":[],"termAccession":"","termSource":""}}],"protocolType":{"@id":"DLEdOQ8acMZQtZitRl135DjIZakVvopMw79xaON6","annotationValue":"Nucleic Acid Extraction","comments":[],"termAccession":"","termSource":"OBI"},"uri":"","version":""},{"@id":"#140227424558384","comments":[],"components":[],"description":"Libraries of extracted RNA samples were built using the Illumina TruSeq RNA sample preparation kit and yielded fragments with 200~500 base pairs.","name":"Library Construction","parameters":[{"@id":"#140227394526464","parameterName":{"@id":"4a5FiDbDQsdVjo0pSH9bDjaOpun5U1omQLtGKcSM","annotationValue":"library selection","comments":[],"termAccession":"","termSource":""}},{"@id":"#140227394523872","parameterName":{"@id":"IGq9rbNXpEWfC8vEpombTe2NvK8MUiWnl5X0tOmQ","annotationValue":"library layout","comments":[],"termAccession":"","termSource":""}},{"@id":"#140227394526800","parameterName":{"@id":"TwgLY1xyJugtDdrDzHOI6nU7K4t4VDF8yLI82OFL","annotationValue":"stranded","comments":[],"termAccession":"","termSource":""}},{"@id":"#140227394525216","parameterName":{"@id":"8WYoCyz2C7EHCUeJopWqPTSkwz6WD98uPi77l4Ik","annotationValue":"Library Kit","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}}],"protocolType":{"@id":"uYh25yoFFpKbko7iJbeWOvPu73hlmrxVf2HgiJMw","annotationValue":"Library Construction","comments":[],"termAccession":"","termSource":"OBI"},"uri":"","version":""},{"@id":"#140227424557472","comments":[],"components":[],"description":"The qualified fragments were ligated with indexed adapters, amplified and subjected for sequencing by Illumina HiSeq 2000 (Illumina, San Diego, CA) to generate paired end reads with a length of 100 bases.","name":"Nucleic Acid Sequencing","parameters":[{"@id":"#140227424845152","parameterName":{"@id":"QZv3O6FfjrX7Rj1AdVBpE7MMkvX0gDPFNyhTgsul","annotationValue":"Sequencing Instrument","comments":[],"termAccession":"","termSource":""}},{"@id":"#140227424844912","parameterName":{"@id":"Gpt4vDjDrU84g95ETwLXCbrKXjfl1JbGRu6ncg88","annotationValue":"Read Length","comments":[],"termAccession":"","termSource":""}},{"@id":"#140227424844240","parameterName":{"@id":"CtQ18ML4iL8up3q8jIQxtenGoYSNWw4i3XMQYFwU","annotationValue":"Base Caller","comments":[],"termAccession":"","termSource":""}},{"@id":"#140227424844624","parameterName":{"@id":"S7hnkkOjx9HSPSLgVfoKjPba3SH20ixWKP1KnGdW","annotationValue":"Quality Score","comments":[],"termAccession":"","termSource":""}}],"protocolType":{"@id":"c0GcTyXeCaqujLM8jF3nfMLbquKXYzQOhsC9fxQ0","annotationValue":"Nucleic Acid Sequencing","comments":[],"termAccession":"","termSource":"OBI"},"uri":"","version":""},{"@id":"#140227394524496","comments":[],"components":[],"description":"Raw fastq files were assessed for % rRNA using HTStream SeqScreener (version 1.3.2) and filtered using Trim Galore! (version 0.6.10). Raw and trimmed fastq file quality was evaluated with FastQC (version 0.12.1), and MultiQC (version 1.26) was used to generate MultiQC reports.","name":"GeneLab raw data processing protocol","parameters":[{"@id":"#140227424091920","parameterName":{"@id":"Ohs1BbENFJo4CWnwszKmpZ4g1nZJNqqJv60k0wyP","annotationValue":"Read Depth","comments":[],"termAccession":"http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl","termSource":"NCIT"}},{"@id":"#140227424089616","parameterName":{"@id":"RaWNd099ZqS9NO9TqfvpU9arANv1Do2iAJueQJMm","annotationValue":"rRNA Contamination","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"@id":"#140227424088944","parameterName":{"@id":"XGdRyLdFBrQ5sINQ7N8WhowWQEznWY4WnzAmBL6l","annotationValue":"Merged Sequence Data","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"@id":"#140227424088800","parameterName":{"@id":"WoqQnOe0wYp5oJdMtNlLbe7bcXgG6P1BgtOCncYd","annotationValue":"MultiQC File Names","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}}],"protocolType":{"@id":"gHRCpX8ZCZrvMb1jv0PpSihU4DurynDUUnkOSfet","annotationValue":"data transformation","comments":[],"termAccession":"http://purl.obolibrary.org/obo/OBI_0200000","termSource":"OBI"},"uri":"","version":""},{"@id":"#140227394527088","comments":[],"components":[],"description":"Data were processed as described in GL-DPPD-7101-G (<a href=\"https://github.com/nasa/GeneLab_Data_Processing/blob/master/RNAseq/Pipeline_GL-DPPD-7101_Versions/GL-DPPD-7101-G.md\" target=\"_\" >https://github.com/nasa/GeneLab_Data_Processing/blob/master/RNAseq/Pipeline_GL-DPPD-7101_Versions/GL-DPPD-7101-G.md</a>), using NF_RCP version 2.1.0 (https://github.com/nasa/GeneLab_RNASeq_Workflow/tree/NF_RCP_2.1.0). In short, raw fastq files were filtered using Trim Galore! (version 0.6.10) powered by Cutadapt (version 4.2). Trimmed fastq file quality was evaluated with FastQC (version 0.12.1), and MultiQC (version 1.26) was used to generate MultiQC reports. Drosophila Melanogaster STAR and RSEM references were built using STAR (version 2.7.11b) and RSEM (version 1.3.3), respectively, Ensembl release 112, genome assembly BDGP6 (Drosophila_melanogaster.BDGP6.46.dna.toplevel.fa) and the following gtf annotation file: Drosophila_melanogaster.BDGP6.46.112.gtf. Trimmed reads were aligned to the Drosophila Melanogaster STAR reference with STAR (version 2.7.11b) and alignment log files were compiled with MultiQC (version 1.26). Aligned reads were assessed for strandedness using RSeQC infer_experiment.py (version 5.0.4), gene body coverage using RSeQC geneBody_coverage.py (version 5.0.4), inner distance was assessed using RSeQC inner_distance.py (version 5.0.4), and distribution of RNA features using RSeQC read_distribution.py (version 5.0.4). Aligned reads from all samples were quantified using RSEM (version 1.3.3), with strandedness set to reverse and RSEM count log files were compiled with MultiQC (version 1.26). To create a set of rRNA-removed quantification data, Ensembl IDs mapping to ribosomal RNA (rRNA) were removed from the RSEM gene count data. Both the original set of RSEM quantification data and the rRNA-removed data were subject to differential gene expression analysis as follows. A runsheet was generated with dp_tools (version 1.3.8) and the runsheet and quantification data were imported to R (version 4.4.2) with tximport (version 1.34.0) and normalized with DESeq2 (version 1.46.0) median of ratios method. Normalized gene counts were subject to differential expression analysis. Differential expression analysis was performed in R (version 4.4.2) using DESeq2 (version 1.46.0); all groups were compared pairwise using the Wald test and the likelihood ratio test was used to generate the F statistic p-value. Gene annotations were assigned using the custom annotation tables generated in-house as detailed in GL-DPPD-7110-A (<a href=\"https://github.com/nasa/GeneLab_Data_Processing/blob/GL_RefAnnotTable-A_1.1.0/GeneLab_Reference_Annotations/Pipeline_GL-DPPD-7110_Versions/GL-DPPD-7110-A/GL-DPPD-7110-A.md\" target=\"_\" >https://github.com/nasa/GeneLab_Data_Processing/blob/GL_RefAnnotTable-A_1.1.0/GeneLab_Reference_Annotations/Pipeline_GL-DPPD-7110_Versions/GL-DPPD-7110-A/GL-DPPD-7110-A.md</a>), with STRINGdb (version 2.16.4), PANTHER.db (version 1.0.12), and org.Dm.eg.db (version 3.19.1).","name":"GeneLab RNAseq data processing protocol","parameters":[{"@id":"#140227422272672","parameterName":{"@id":"W9tes96RPBkIuuA0eNexPPFOXF4m5lLPOIBTnVsM","annotationValue":"trimmed sequence data","comments":[],"termAccession":"http://purl.obolibrary.org/obo/OBI_0002569","termSource":"OBI"}},{"@id":"#140227422272624","parameterName":{"@id":"s2HskUjUzSQmahcRYDfv1xBVjYScvewE8EO773hd","annotationValue":"Trimmed Sequence Data/Trimming Reports","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"@id":"#140227422271760","parameterName":{"@id":"Paz4Pjo6sV6E66RG3a9xuZDjKKpk7ywwq3VwmAwn","annotationValue":"Trimmed Sequence Data/MultiQC Reports","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"@id":"#140227422273200","parameterName":{"@id":"lqpWRJZ7O2rPhdA4uPNANCqeFig4cQhw07RfB2f5","annotationValue":"aligned sequence data","comments":[],"termAccession":"http://purl.obolibrary.org/obo/OBI_0002580","termSource":"OBI"}},{"@id":"#140227422269744","parameterName":{"@id":"SPhWEr1D3r2VJ9OKO5b94MEY02Ipod6UwkLtQaRk","annotationValue":"Aligned Sequence Data/Unmapped Reads","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"@id":"#140227422271088","parameterName":{"@id":"3AwnKZQDUPRaMntinM9bvBrGHpnb8qc6GaaZRIQh","annotationValue":"Aligned Sequence Data/Alignment Logs","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"@id":"#140227422270512","parameterName":{"@id":"ib7AEGeVUoAruCpz91Qn6GXdO3E5d8k0DSeT2EQR","annotationValue":"Aligned Sequence Data/MultiQC Reports","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"@id":"#140227422272480","parameterName":{"@id":"QcbiokEiY9OO2PO8IXfNhCwNUeMq4JM2ugyguLO3","annotationValue":"RSeQC/MultiQC Reports","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"@id":"#140227422272048","parameterName":{"@id":"CzV3xNixKDCRnULWE97WbT9v456v77sgf4dPZG0Y","annotationValue":"Raw Counts Data","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"@id":"#140227422270992","parameterName":{"@id":"WXhsQG8JLZ5oK8kUYbPxGSfXi520yz8A4dEHcBKs","annotationValue":"Raw Counts Tables","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"@id":"#140227422270464","parameterName":{"@id":"w31o7Q91WYOVYIwRCqOCvdUs4H84WG2M5y8Qgu1N","annotationValue":"Raw Counts Data/MultiQC Reports","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"@id":"#140227422272192","parameterName":{"@id":"Lns3jxVPjBQ2dUuFO7KyPzSqST1hCHcuYbzwld4i","annotationValue":"Normalized Counts Data","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"@id":"#140227422270944","parameterName":{"@id":"c4UoiNar4sA4ty0VawH08rhaf4AR7F8drWBP91tt","annotationValue":"differential expression analysis data","comments":[],"termAccession":"http://purl.obolibrary.org/obo/OBI_0002584","termSource":"OBI"}}],"protocolType":{"@id":"gHRCpX8ZCZrvMb1jv0PpSihU4DurynDUUnkOSfet","annotationValue":"data transformation","comments":[],"termAccession":"http://purl.obolibrary.org/obo/OBI_0200000","termSource":"OBI"},"uri":"","version":""}],"publicReleaseDate":"02-Dec-2020","publications":[{"authorList":"Walls Stanley Mark, Diop Soda, Birse Ryan, Elmen Lisa, Gan Zhouhui, Kalvajuri Sreehari, Reddy Curran, Taylor Erika, Trinh Bosco, Vogler Georg, Zardnt Rachel, McCulloch Andrew, Lee Peter, Bhattacharya Sharmila, Bodmer Rolf, Ocorr Karen","comments":[],"doi":"10.1016/j.celrep.2020.108445.3667140","pubMedID":"33242407","status":{"@id":"LmdAvi3HYaAIgsfwpY1sWHGrDR5sHm3luQJDg1Ay","annotationValue":"published","comments":[],"termAccession":"http://www.ebi.ac.uk/efo/EFO_0001796","termSource":"EFO"},"title":"Prolonged Exposure to Microgravity Reduces Cardiac Contractility and Initiates Remodeling in Drosophila"}],"studyDesignDescriptors":[{"@id":"4RixOBC6fhf4nbWNsIBIHQNECE6Cps7f9LJdaqgK","annotationValue":"transcription profiling by high throughput sequencing","comments":[],"termAccession":"http://www.ebi.ac.uk/efo/EFO_0002770","termSource":"EFO"}],"submissionDate":"04-Nov-2020","title":"Heart Flies - effect of microgravity on heart function in Drosophila","unitCategories":[{"@id":"HD9tp2SLnR0wXOGt79HG2Wa7QP9SkYuVwR6aCHGl","annotationValue":"day","comments":[],"termAccession":"http://purl.obolibrary.org/obo/UO_0000033","termSource":"UO"},{"@id":"rXEqs7vuV48f7fvwnkTqN785nMDguXNcuEYyqAKs","annotationValue":"degree Celsius","comments":[],"termAccession":"http://purl.obolibrary.org/obo/UO_0000027","termSource":"UO"},{"@id":"SHRIFGDc50meal3f60aKnlHyc0mXQoqiyW1BovrZ","annotationValue":"milligray","comments":[],"termAccession":"http://purl.obolibrary.org/obo/UO_0000142","termSource":"UO"},{"@id":"kQ7xX41a7tbtWDBfRbxYY3YI0jpDae5GiMFij6BD","annotationValue":"milligray per day","comments":[],"termAccession":"http://purl.obolibrary.org/obo/UO_0010063","termSource":"UO"},{"@id":"EN78WNpG5NZElsP9sj1OVW0TMS8NNuDr1mEzIqd2","annotationValue":"week","comments":[],"termAccession":"http://purl.obolibrary.org/obo/UO_0000034","termSource":"UO"}]}],"version":5}},"success":true}
