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Gene annotations were assigned for every probeset that mapped to exactly one Ensembl gene ID using the custom annotation tables generated in-house as detailed in GL-DPPD-7110 (<a href=\"https://github.com/nasa/GeneLab_Data_Processing/blob/GL_RefAnnotTable_1.0.0/GeneLab_Reference_Annotations/Pipeline_GL-DPPD-7110_Versions/GL-DPPD-7110/GL-DPPD-7110.md\" target=\"_\" >https://github.com/nasa/GeneLab_Data_Processing/blob/GL_RefAnnotTable_1.0.0/GeneLab_Reference_Annotations/Pipeline_GL-DPPD-7110_Versions/GL-DPPD-7110/GL-DPPD-7110.md</a>), with STRINGdb (version 2.8.4), PANTHER.db (version 1.0.11), and org.Hs.eg.db (version 3.15.0).","name":"GeneLab microarray data processing protocol","parameters":[{"@id":"#139758270444256","parameterName":{"@id":"K118AXUyIEG1ZYS51uguXcjP8ntWEkDmw8vHFKwv","annotationValue":"Raw Intensities Table","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"@id":"#139758270446416","parameterName":{"@id":"RpH2RFEgfhHH505JAZKmbs1qSQxqTEWunuvVxI6T","annotationValue":"Normalized Expression Table","comments":[],"termAccession":"https://osdr.nasa.gov/","termSource":""}},{"@id":"#139758270444496","parameterName":{"@id":"c4UoiNar4sA4ty0VawH08rhaf4AR7F8drWBP91tt","annotationValue":"differential expression analysis data","comments":[],"termAccession":"http://purl.obolibrary.org/obo/OBI_0002584","termSource":"OBI"}}],"protocolType":{"@id":"gHRCpX8ZCZrvMb1jv0PpSihU4DurynDUUnkOSfet","annotationValue":"data transformation","comments":[],"termAccession":"http://purl.obolibrary.org/obo/OBI_0200000","termSource":"OBI"},"uri":"","version":""}],"publicReleaseDate":"11-Aug-2017","publications":[{"authorList":"Thiel CS, Hauschild S, Huge A, Tauber S, Lauber BA, Polzer J, Paulsen K, Lier H, Engelmann F, Schmitz B, Sch\u00fctte A, Layer LE, Ullrich O","comments":[],"doi":"10.1038/s41598-017-05580-x","pubMedID":"28701719","status":{"@id":"LmdAvi3HYaAIgsfwpY1sWHGrDR5sHm3luQJDg1Ay","annotationValue":"published","comments":[],"termAccession":"http://www.ebi.ac.uk/efo/EFO_0001796","termSource":"EFO"},"title":"Dynamic gene expression response to altered gravity in human T cells"},{"authorList":"Thiel CS, Huge A, Hauschild S, Tauber S, Lauber BA, Polzer J, Paulsen K, Lier H, Engelmann F, Schmitz B, Sch\u00fctte A, Layer LE, Ullrich O.","comments":[],"doi":"10.1038/s41526-017-0028-6","pubMedID":"28868355","status":{"@id":"LmdAvi3HYaAIgsfwpY1sWHGrDR5sHm3luQJDg1Ay","annotationValue":"published","comments":[],"termAccession":"http://www.ebi.ac.uk/efo/EFO_0001796","termSource":"EFO"},"title":"Stability of gene expression in human T cells in different gravity environments is clustered in chromosomal region 11p15.4"},{"authorList":"Vogel J, Thiel CS, Tauber S, Stockmann C, Gassmann M, Ullrich O","comments":[],"doi":"10.3390/ijms20020436","pubMedID":"30669540","status":{"@id":"LmdAvi3HYaAIgsfwpY1sWHGrDR5sHm3luQJDg1Ay","annotationValue":"published","comments":[],"termAccession":"http://www.ebi.ac.uk/efo/EFO_0001796","termSource":"EFO"},"title":"Expression of Hypoxia-Inducible Factor 1\u03b1 (HIF-1\u03b1) and Genes of Related Pathways in Altered Gravity"},{"authorList":"Tauber S, Christoffel S, Thiel CS, Ullrich O","comments":[],"doi":"10.3390/ijms19092814","pubMedID":"30231541","status":{"@id":"LmdAvi3HYaAIgsfwpY1sWHGrDR5sHm3luQJDg1Ay","annotationValue":"published","comments":[],"termAccession":"http://www.ebi.ac.uk/efo/EFO_0001796","termSource":"EFO"},"title":"Transcriptional Homeostasis of Oxidative Stress-Related Pathways in Altered Gravity"}],"studyDesignDescriptors":[{"@id":"h0shfCKjUqWbQbBHH9iZLu4lX5tHwbttyXVJiTw5","annotationValue":"transcription profiling by array","comments":[],"termAccession":"http://www.ebi.ac.uk/efo/EFO_0002768","termSource":"EFO"}],"submissionDate":"30-Jan-2017","title":"Dynamic gene expression response to altered gravity in human T cells (sounding rocket flight)","unitCategories":[{"@id":"rXEqs7vuV48f7fvwnkTqN785nMDguXNcuEYyqAKs","annotationValue":"degree Celsius","comments":[],"termAccession":"http://purl.obolibrary.org/obo/UO_0000027","termSource":"UO"},{"@id":"Ib5w988uKcWsLn6oWb8xDN73ZHHxLVOCkRwL3TIQ","annotationValue":"second","comments":[],"termAccession":"http://purl.obolibrary.org/obo/UO_0000010","termSource":"UO"}]}],"version":6}},"success":true}
